Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1938 ATGGCAAGATCTTCGCTGGATCCCCGGAATTGTTTGCTGTTACTGCTCTATAGCTTGGCGGGTTTTTGGCCTTTTGCTACCTCGCAGGCTGAAAATGACGTCCAATGCCTTAAAGGCATCAAAAGTTCTTTCAGTGATCCCCAGGGGAAGCTCGCTTCTTGGCGTTTCGATAACAACACCGCCGGTTTCATATGCACGTTCGTCGGCGTTACGTGCTGGAACCCCCAGGAGAATCGGGTCCTCAATCTGGAGCTCCGGGATATGAAGCTCTCGGGCCAGGTGCCGGAATCGTTGAAGTATTGCGGTAGGAGTATGCAGAAACTGGATCTTGGGTCCAACGACGTTTCCGGTACGATCCCTTCTCGGATATGCGATTGGTTGCCATTTTTAGTAACACTGGACTTGTCCGGTAATCGTCTCTCTGGTCATATCCCTCCTACTCTTGTGAATTGCACTTACTTGAATACCTTGATTCTTTCCAATAATCAGCTTTCTGGTTCTGTTCCTTCCGAATTTGGGAGTCTGACTAGGCTTAGGACATTTTCTGTTGCCAATAATCATCTTACTGGTACGATTCCTTCGTATTTAAGTGGTTATGACAAGGAAGATTTTGCTGGGAATAGTGGGCTTTGTGGGGGTCCCCTTGGATCCAAGTGTGGTGGGTTGAGTAGGAAGAATCTTGCTATTATCATCGCTGCTGGAGTATTTAGCGCTGCTGCTTCTTTGTTATTGGCTTTTGGATTGTGGTGGTGGTATCATTTGCGGTTGGCTAGGAATAAGAATGGGCTTGGGGTTGGAATCAGCGATGATTGGGCTGCGAAGTTGAGGGGTCACAAACTTGTTCAAGTTACACTGTTTCAGAAACCCCTTGTGAAGGTTAAACTAGGAGATTTGATGGCGGCTACGAATAATTTCAATTCTAAAAATATCATCATGTCTTCAAGAACTGGGACTACTTATAAAGCAGACCTTCCTGATGGTTCAACACTTGCGGTCAAGCGGCTTAACACCTGTAAGATTGGAGAAAGACAGTTTCGCATGGAGATGAGTAGGCTAGGACAAGTCAGGCATCCGAACTTGGCACCCCTTTTAGGTTTCTGTGTGGTTGAGGAGGAAAAACTTTTGGTTTATAAGCACATGTCTAATGGAACTTTGTCTTCTTCGTTGCATAAAGATGGTACTGGATCGGAACTGGATTGGCCAATGAGATTCAGGATAGGATTTGGTGCCGCCAGGGGTCTTGCATATCTGCATCATGGGTGTCATCCTCCAATAAGACACCGAAACATCTCTTCCAATGTGATAGTTATTGATGAAGATTTTGATGCTCGATTAATGGACTTTGGCCTTGCTAGGCTAATGACATCTGATTCCAACGATGGTAACTTCGTGAGTGGGGACTTGGGGGAACTTGGCTATGTAGCTCCAGAATATCCGAGCACCCTTGTTGCTTCTCTAAAAGGGGATGTTTATGGATTTGGGATTGTTCTTTTGGAGTTAATTACCGGTCGCAAACCTCTTGAAGTTGGCAATGGAGAGGAAGAGTTTAAGGGCAACTTAGTGGATTGGGTGAATATGTTTTCTAGTTCTGGTCGAATTAAGGATTGCATTGATAAGGCCGTATGTGGAAGAGGGCATGATGAGGAGATTTTGCAGCTTCTGAAAATTGCTTGTAATTGTGTGGTTTCTCGCCCCAAGGACAGGTGGTCCATGTACCAGGTTTATCATTCCTTGAAGAGTTTGTCCAAAGACTACAATTTCTCTGAACATGATGATGAGTTTCCGTTGATTTTTAACAAGCCAGAGTCGGCATAA 1815 0.4512 MARSSLDPRNCLLLLLYSLAGFWPFATSQAENDVQCLKGIKSSFSDPQGKLASWRFDNNTAGFICTFVGVTCWNPQENRVLNLELRDMKLSGQVPESLKYCGRSMQKLDLGSNDVSGTIPSRICDWLPFLVTLDLSGNRLSGHIPPTLVNCTYLNTLILSNNQLSGSVPSEFGSLTRLRTFSVANNHLTGTIPSYLSGYDKEDFAGNSGLCGGPLGSKCGGLSRKNLAIIIAAGVFSAAASLLLAFGLWWWYHLRLARNKNGLGVGISDDWAAKLRGHKLVQVTLFQKPLVKVKLGDLMAATNNFNSKNIIMSSRTGTTYKADLPDGSTLAVKRLNTCKIGERQFRMEMSRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMSNGTLSSSLHKDGTGSELDWPMRFRIGFGAARGLAYLHHGCHPPIRHRNISSNVIVIDEDFDARLMDFGLARLMTSDSNDGNFVSGDLGELGYVAPEYPSTLVASLKGDVYGFGIVLLELITGRKPLEVGNGEEEFKGNLVDWVNMFSSSGRIKDCIDKAVCGRGHDEEILQLLKIACNCVVSRPKDRWSMYQVYHSLKSLSKDYNFSEHDDEFPLIFNKPESA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1938 604 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Prci3g1938 604 Gene3D Transferase(Phosphotransferase) domain 1 380 600 - -
Prci3g1938 604 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Prci3g1938 604 Gene3D Phosphorylase Kinase; domain 1 265 379 - -
Prci3g1938 604 SUPERFAMILY L domain-like 31 200 - -
Prci3g1938 604 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 580 - -
Prci3g1938 604 Pfam Protein kinase domain 316 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1938 604 Pfam Leucine rich repeat 130 188 IPR001611 GO:0005515
Prci3g1938 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 267 379 - -
Prci3g1938 604 SUPERFAMILY Protein kinase-like (PK-like) 283 578 IPR011009 -
Prci3g1938 604 CDD STKc_IRAK 311 581 - -
Prci3g1938 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 30 220 - -
Prci3g1938 604 ProSiteProfiles Protein kinase domain profile. 305 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1938 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 380 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1938 Prci-Chr3 33863818 33866113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1938 8 603 Receptor kinase-like Gene Family AT3G28450 63.350 0.0 772
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Prci3g1938 Pkinase 1.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1938 - - lang:109347314 907.131