Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1928 ATGATGACAATTAAAGGAGGCTCGAACAAGGCCTGCGCTGCATGTAAGTATCAGAGAAGACGATGCACAAAAGAGTGCCCTTTGGCTCCTTATTTCCCTGCAGATCAACCTAAAAAGTTCAGCAATGCTCACCGTTTGTTTGGAGTCGCCAACATCAAGAAGATTCTGGATCAGGTAGAACCCAGGAAAAGAGATGAAGCCATGACATCTATTATCTTTGAATCCGATATGCGAGAAAAGTTTCCTGTTCTGGGTTGTTTAGGCCTCACATGGAACTACAATAATCAGATACTCGCGGCCATGGAAGAGCTGCGTTATCTGAAACTCAGGCTTGCCATTCACAAACAACAATTGCACTGTCATGTTTCTCATCAAATCTCTCCTTCTCATCCAGTAACAGAATCAATGCCTTTTAGTACAGATACCTTGTCCGTGTCGAACTATTTGCAATATAATATTAATCTCAATAACAACCAAGTTGTTACCTTTGATGGTGGAGGTGGAAGTGAAGTGTTTGGTCTTCAACAATCCTTCAGTTCCATGGCTGTACCATCATCTGATTTCATAGCCAACCAACCAGAAATGGGCACGGTTGAATATGAAGATATTAATCCTTATAATGTAATGGTAGATGACAGGCAATTATTTATCGAATACAGAGAAGAACCATGTGAGTCAAGTAAGGAATCATCACTGACAGAAGCAAAGTGTCATCATATTGAGCGTGGTTCTGAGCTTAAGAGTGCAGCAGCATACATGGGTCTCACAAGTGTGAAAGGATGA 783 0.4138 MMTIKGGSNKACAACKYQRRRCTKECPLAPYFPADQPKKFSNAHRLFGVANIKKILDQVEPRKRDEAMTSIIFESDMREKFPVLGCLGLTWNYNNQILAAMEELRYLKLRLAIHKQQLHCHVSHQISPSHPVTESMPFSTDTLSVSNYLQYNINLNNNQVVTFDGGGGSEVFGLQQSFSSMAVPSSDFIANQPEMGTVEYEDINPYNVMVDDRQLFIEYREEPCESSKESSLTEAKCHHIERGSELKSAAAYMGLTSVKG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1928 260 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 136 - -
Prci3g1928 260 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Prci3g1928 260 Pfam Lateral organ boundaries (LOB) domain 11 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1928 Prci-Chr3 33742775 33743810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1928 2 115 AS2 family AT3G47870 55.263 1.73e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci3g1928 LOB 7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1928 - - pcin:129305015 516.538