Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1915 ATGTTTTATCAAAATGACAGGAAACTTAGGGTTATTGCATACTTTTCCTCATTCATTTCTTCTTCATTTCTAACATACCTGTGTTTCGTTTATTTCATTCGGTGGGAACGTGGATTGGAAATAGCAGTCTACCTTGGAGCTTATGATGAAGAAGAATCTGCGGCCCGAGCATATGATTTAGCTGCACTGAAATACTGGGGAACGAATGATCTTTATCCTTGCTTGGATACTGATCATCTCATGCTCCTCATACTTCCAACAGATATCAATTACATGAAAGAGATAGTGATAATGCAGACTATGACAAAAGAGGAGTATTTGGCTACTTTAAGAAGAAAGAGTAGTGGCTTTTCAAGAGGCGTGTCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCAAGGATAGGGCGGGTTTTTGGAAACAAATATCTCTACCTTGGCACATACTGCACCCAGGAGGAAGCTGCCCGTGCCTACGACATTGCAGCCATTGAGTACAGAGGGATTCATGCTGTAACCAACTTTGACTTGAGCAACTACATCACACTGTTAAGACCTGCAAGAGGAAATATCCCGGAAGCAATGCTAGCATCGCAGATCGTACCAGAGTTTCAGACAATGGCATCTCCATCTAACAATACTTCAATAGAGGAGTCCAAAACATTGTCCCTTGACAACAATTTTTTCAACACAGATTTCCTGAAGTCTTCACAAAAGCAAGAGGTCTTTGAGAACAAACCCGCTTTTATCTCAAGCAATAAGTCATCTTCACCCACTGCTCTTGGCCTTCTTCTCCGTTCTTCAATTTTCAGGGAATTAGTGGAAAAGAATTTGAATCTATTTGGAGATGAAATTGATGGGGAAGACGTGATGGATCAACAACCACATATAGCTGGTGATGATGAGTTGAGTAGAATATTCTATGATAGTATTGGTGATATCCCGTTTGCCGCTGATCCTAACAACTATGATTTTGCAAGAGAGCTCCACTCCATCATATGA 1017 0.412 MFYQNDRKLRVIAYFSSFISSSFLTYLCFVYFIRWERGLEIAVYLGAYDEEESAARAYDLAALKYWGTNDLYPCLDTDHLMLLILPTDINYMKEIVIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYCTQEEAARAYDIAAIEYRGIHAVTNFDLSNYITLLRPARGNIPEAMLASQIVPEFQTMASPSNNTSIEESKTLSLDNNFFNTDFLKSSQKQEVFENKPAFISSNKSSSPTALGLLLRSSIFRELVEKNLNLFGDEIDGEDVMDQQPHIAGDDELSRIFYDSIGDIPFAADPNNYDFARELHSII 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1915 338 SMART rav1_2 123 187 IPR001471 GO:0003700|GO:0006355
Prci3g1915 338 SUPERFAMILY DNA-binding domain 122 183 IPR016177 GO:0003677
Prci3g1915 338 ProSiteProfiles AP2/ERF domain profile. 123 181 IPR001471 GO:0003700|GO:0006355
Prci3g1915 338 FunFam AP2-like ethylene-responsive transcription factor 122 183 - -
Prci3g1915 338 Gene3D AP2/ERF domain 122 183 IPR036955 GO:0003700|GO:0006355
Prci3g1915 338 Gene3D AP2/ERF domain 29 74 IPR036955 GO:0003700|GO:0006355
Prci3g1915 338 SUPERFAMILY DNA-binding domain 41 69 IPR016177 GO:0003677
Prci3g1915 338 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 43 240 - -
Prci3g1915 338 ProSiteProfiles AP2/ERF domain profile. 2 78 IPR001471 GO:0003700|GO:0006355
Prci3g1915 338 CDD AP2 122 183 IPR001471 GO:0003700|GO:0006355
Prci3g1915 338 Pfam AP2 domain 122 173 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1915 Prci-Chr3 33614069 33615964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1915 43 197 AP2-EREBP Transcription Factor Family AT3G54320 69.677 3.24e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci3g1915 AP2 5.7e-11 CL0081