Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1908 ATGTCAGTGGAGATCTCGGCAAAACTGTCTGGTCCTCGTGGCCTTGAAGCAGATTGCTATGTTCAAGAGAATGATGAACTCAAGTCTGCTAAAGAAGAGATGGGTGGGGTGAAAGAAGAAAATGAAAGGTTGAAGGTGATGCTGGACCGAGTCGAAAAGGATTATCAGTCCCTCCAATTGCGTTTCTTTGATATCTTGCGGAGAGAAGCTTCTGAAAAAGGCATAGCAGATTCAGCCAATTCCCATGATGAAACTGAAGAGCCTGAGCTCGTGTCACTTTGCCTGGGAAGAAGTCCAAGGGACCCTAAAAAAGATACCAGAATTGGCAACTCGACTAAACTAAAAGAAAGTGAAGATCTGGAGGCTCGCCTTACCCTTGGATTAGACTCTAAATGTGAAGTATCAATGGAGGTGGTGTCTGATCAGAGCCCAGTAAACAGCTCAGGAGAAACCAAGGAAGCAGATGTTGGTGGAACATGTCCAACAAATAAATCTCTCAAAGCCAAAAATGGAGAAGATGAAATTTCAGAGCAAATACCTGCCAAGAGAGCGAGGGTTTCTGTCAGGGCAAGATGTGACACTCCCACGATGAGTGATGGATGCCAGTGGAGAAAATATGGACAGAAGATAGCCAAAGGGAATCCATGTCCACGTGCATACTATCGCTGCACGGTTGCACCAGCATGTCCAGTCAGAAAACAGGTGCAAAGATGTGCCGATGACATGACCATCTTAATCACGACATATGAAGGGACCCACAACCACCCACTCCCAGTTTCAGCCACAGCCATGGCTTCCACCACTTCAGCTGCTGCTTCCATGCTATTGTCAGGTTCTTCAACATCTCAGCCTGCGGACAACATTTTTGCATCTTTCACAAATGCTCCTAAACTGCTTAATGGTCAAAACGTTGGACATGTCGATCTATCAAAAGCAGAACAGGCCTTCTTGCCCAACCCTGCATCACCTTTGTTCCCAACAATCACTCTGGACTTAACTTCTGCTTCATCTTCATCAACCCATGTCAATAATCGTCCACCTTTGAACTTTGCTTTAGGCCCAAGATTTCCTCCAACAAGTCTAAGTTTTTGCTCAGCGGAGCCCAACATTCCACAAGCAGTATGGAGTAATGGAATCCTTAGTAATGAGAAAACCCACATGAGGTCTCCTGACCTGGGAAATCAATTTCAACAACAGTTCCATCTAAACTGCATGCAAAACCAGGCTCCTTCACGGGAGGCTTTAGCAGAAACCTTAACCAAAGCAATCAGCACAGATCCAAGACTTCGATCAGTAATAGCTGCAGCAGTTTCATCTATAGTGAGTCAAGGATCCACCAATCTGAACCAGCTGAGGGGAGGGGAAATTTCAGAGTTAGGGTTGAACTTGAAACAAGGAGAACATGCCCAGTTTGCTTCTTCCAGTACGTTGACCCAAAATGGGAAAGGATGCTTACCAGGTTATTTCAACAGATTGTCTTCAAATTCTTATACTGGAAACTTCATGCCTCTCCAACCTCCAGTTCCATTTTCTGTCTCTAAGAGAAGCGTGCCTCCTACCATTGGTGATCAGATCAATCATTAA 1584 0.4508 MSVEISAKLSGPRGLEADCYVQENDELKSAKEEMGGVKEENERLKVMLDRVEKDYQSLQLRFFDILRREASEKGIADSANSHDETEEPELVSLCLGRSPRDPKKDTRIGNSTKLKESEDLEARLTLGLDSKCEVSMEVVSDQSPVNSSGETKEADVGGTCPTNKSLKAKNGEDEISEQIPAKRARVSVRARCDTPTMSDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDMTILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPADNIFASFTNAPKLLNGQNVGHVDLSKAEQAFLPNPASPLFPTITLDLTSASSSSTHVNNRPPLNFALGPRFPPTSLSFCSAEPNIPQAVWSNGILSNEKTHMRSPDLGNQFQQQFHLNCMQNQAPSREALAETLTKAISTDPRLRSVIAAAVSSIVSQGSTNLNQLRGGEISELGLNLKQGEHAQFASSSTLTQNGKGCLPGYFNRLSSNSYTGNFMPLQPPVPFSVSKRSVPPTIGDQINH 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1908 527 MobiDBLite consensus disorder prediction 75 90 - -
Prci3g1908 527 MobiDBLite consensus disorder prediction 98 114 - -
Prci3g1908 527 MobiDBLite consensus disorder prediction 75 114 - -
Prci3g1908 527 Gene3D WRKY domain 182 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1908 527 MobiDBLite consensus disorder prediction 137 153 - -
Prci3g1908 527 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 24 445 IPR044810 GO:0003700
Prci3g1908 527 Coils Coil 20 61 - -
Prci3g1908 527 ProSiteProfiles WRKY domain profile. 192 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1908 527 SMART WRKY_cls 197 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1908 527 FunFam probable WRKY transcription factor 31 182 259 - -
Prci3g1908 527 Pfam WRKY DNA -binding domain 199 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1908 527 MobiDBLite consensus disorder prediction 137 174 - -
Prci3g1908 527 SUPERFAMILY WRKY DNA-binding domain 190 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1908 Prci-Chr3 33526479 33529348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1908 34 492 WRKY Transcription Factor Family AT5G15130 44.625 2.08e-88 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g1908 WRKY 6.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1908 - - lang:109353541 572.392