Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1906 ATGGGTTATCTGAGGAGAGCTTCGAAGAGGCTAGGGCAGTCTAGCCGTGCACTGTTCTGTTCTCAACCACGCCAAAACAGCAAAGAAAACAGTCGAGTAGATTTGACTCAATACACTCCAGAGCTAATTAGGAACTTCTGTATAATTGCGCATATAGATCATGGCAAGTCCACTCTTGCTGATCGGCTGCTTGAGCTTACGGGGACTATTAAGAAGGGACATGGTCAACCTCAGTATCTTGACAAGTTGCAGGTAGAAAGAGAAAGGGGTATCACGGTTAAAGCCCAGACAGCAACAATGTTCTATAAGCACGGCATTGAGGAAACCACATCTAGTGACGACCAAGGTCCGGCAAACTTTCTGCTAAATCTTATCGACACTCCCGGGCACGTAGACTTCAGTTATGAAGTGTCGAGGTCACTGGCGGCTTGTCAGGGCGCTCTTTTGGTTGTTGATGCTGCTCAAGGAGTGCAGGCGCAAACTGTTGCTAATTTTTATCTTGCTTTTGAATCCAACCTAGCAATTATTCCCGTCATAAACAAAATAGACCAGCCAACTGCTGATCCTGATGGTGTTAAAGCACAACTAAAATCAATGTTTGATCTTGACCCAAGTGACGCACTTTTAACATCTGCTAAAACAGGACAGGGTCTTGAGCAAGTCCTTCCTGCTGTCATAGAGCGCATACCTCCACCTCCTGGGAAGAGTAGTTCTCCTCTACGCATGCTTTTGCTTGATTCTTATTATGATGAATACAAAGGGGTAATATGCCATGTTGCTATTGTTGATGGTGCCCTGCGCAAGGGGGATAAAATTTCATCAGCTGCAACTGGACAGGCTTATGAAGCTTTGGATGTAGGCATCATGCATCCTGAACTTAAATCTACTGGGATGTTGCTTACTGGACAAGTTGGTTATGTTGTAAGTGGCATGCGCTCAACCAAAGAGGCACGTGTTGGAGATACACTTTTCCATACCAGAAGCACTATAGAGCCCCTTCCAGGTTTTAAACCGGCAAAACATATGGTATTCTCTGGTCTTTATCCAGCAGATGGATCTGATTTTGAAGCTCTCAACCATGCAATAGAGAGATTGACATGTAATGATGCTAGTGTCTCTATTACCAAAGAAAGTAGCATGGCCCTAGGTCTGGGGTTCAGGTGTGGTTTCTTAGGCTTACTCCACATGGATGTTTTTCATCAGCGGCTTGAACAGGAGTATGGGGCTCATGTCATCTCAACTGTTCCAACTGTACCTTATATATTTGAGTATTCTGATGGAAGCAAATTGCAAGTTGAGAATCCTGCTGCATTACCCTCTAATCCCAAGCAACGAGTGACAACCTGTTGGGAACCAACAGTGATAGCTACAATTATCATCCCTAGTCAGTATGTGGGGTCTGTTATTACTCTTTGCTCTGAGAGAAGAGGGCAGCAATTGGAGTACTCATTCATTGACAGTCAACGGGCCTTCATGAAGTATCGCTTGCCTTTGAGGGAAATTGTTGTCGACTTTTACAATGAATTAAAGAGTCTAACATCAGGCTATGCTTCATTCGATTATGAGGATGCAGATTATCAGCAATCTGATCTGGTGAAACTTGACATTCTCTTGAATGGACAACCAGTTGATGCAATGGCAACCATTGTTCATAAGTTGAAAGCATATCGAGTTGGGCGTGAACTAGTGGAGAAATTGAAGAAAGTTATAGACAGGCAAATGTTTGAGATAACCGTACAAGCTGCTGTTGGGTCAAAAGTTATAGCAAGGGAGACGATTTCAGCTATGAGGAAAAATGTTCTTGCCAAGTGTTATGGCGGTGATGTTACTCGGAAGAGGAAGCTATTGGAGAAGCAAAAAGAAGGAAAGAAGCGAATGAAACGAGTTGGTTCCGTCGATATACCACAAGAGGCATTCCATGAATTATTGAAAGTTTCATGA 1941 0.4353 MGYLRRASKRLGQSSRALFCSQPRQNSKENSRVDLTQYTPELIRNFCIIAHIDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHGIEETTSSDDQGPANFLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLAIIPVINKIDQPTADPDGVKAQLKSMFDLDPSDALLTSAKTGQGLEQVLPAVIERIPPPPGKSSSPLRMLLLDSYYDEYKGVICHVAIVDGALRKGDKISSAATGQAYEALDVGIMHPELKSTGMLLTGQVGYVVSGMRSTKEARVGDTLFHTRSTIEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKESSMALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLQVENPAALPSNPKQRVTTCWEPTVIATIIIPSQYVGSVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSLTSGYASFDYEDADYQQSDLVKLDILLNGQPVDAMATIVHKLKAYRVGRELVEKLKKVIDRQMFEITVQAAVGSKVIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1906 646 CDD EF4_III 341 416 - -
Prci3g1906 646 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 41 233 IPR000795 GO:0003924|GO:0005525
Prci3g1906 646 Hamap Elongation factor 4 [lepA]. 40 646 IPR006297 GO:0005525
Prci3g1906 646 NCBIfam translation elongation factor 4 42 645 IPR006297 GO:0005525
Prci3g1906 646 Gene3D Translation factors 235 333 - -
Prci3g1906 646 Pfam Elongation factor Tu GTP binding domain 43 230 IPR000795 GO:0003924|GO:0005525
Prci3g1906 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 272 IPR027417 -
Prci3g1906 646 Gene3D Elongation Factor G (Translational Gtpase), domain 3 334 415 - -
Prci3g1906 646 NCBIfam small GTP-binding protein domain 45 221 IPR005225 GO:0005525
Prci3g1906 646 CDD LepA 44 229 - -
Prci3g1906 646 FunFam Translation factor GUF1, mitochondrial 530 604 - -
Prci3g1906 646 FunFam Elongation factor 4 40 234 - -
Prci3g1906 646 Gene3D - 530 604 IPR038363 -
Prci3g1906 646 SUPERFAMILY EF-G C-terminal domain-like 450 544 IPR035647 -
Prci3g1906 646 PANTHER TRANSLATION FACTOR GUF1-RELATED 16 645 IPR006297 GO:0005525
Prci3g1906 646 CDD lepA_C 451 530 IPR035654 -
Prci3g1906 646 Gene3D - 416 529 - -
Prci3g1906 646 Gene3D - 41 234 IPR027417 -
Prci3g1906 646 FunFam Translation factor GUF1, mitochondrial 334 415 - -
Prci3g1906 646 SUPERFAMILY EF-G C-terminal domain-like 342 419 IPR035647 -
Prci3g1906 646 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 81 96 IPR031157 -
Prci3g1906 646 PRINTS GTP-binding elongation factor signature 45 58 IPR000795 GO:0003924|GO:0005525
Prci3g1906 646 PRINTS GTP-binding elongation factor signature 175 184 IPR000795 GO:0003924|GO:0005525
Prci3g1906 646 PRINTS GTP-binding elongation factor signature 123 133 IPR000795 GO:0003924|GO:0005525
Prci3g1906 646 PRINTS GTP-binding elongation factor signature 139 150 IPR000795 GO:0003924|GO:0005525
Prci3g1906 646 PRINTS GTP-binding elongation factor signature 88 96 IPR000795 GO:0003924|GO:0005525
Prci3g1906 646 FunFam Translation factor GUF1, mitochondrial 235 333 - -
Prci3g1906 646 FunFam Translation factor GUF1, mitochondrial 416 528 - -
Prci3g1906 646 CDD EF4_II 240 325 - -
Prci3g1906 646 Pfam Elongation factor G C-terminus 450 536 IPR000640 -
Prci3g1906 646 Pfam GTP-binding protein LepA C-terminus 538 644 IPR013842 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1906 Prci-Chr3 33520882 33526017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1906 43 184 Eukaryotic Initiation Factors Gene Family AT1G56070 40.972 2.95e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1906 K21594 - qsu:111987059 1123.61