Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1905 ATGGGTTATCTGAGGAGAGCTTCGAAGAGGCTAGGGCAGTCTAGGTACCTGTCCCTGTTGTTTAATTCAACCCCGTTGTCCTCCATTTACGGAGGCATATCATTAGAATTAGAAAGCAGACTAATTTGTCGTCGCTTTGCTCTAAGCCGTGCACTGTTCTGTTCTCAACCACGCCAAAACAGCAAAGAAAACAGTCGAGTAGATTTGACTCAATACACTCCAGAGCTAATTAGGAACTTCTGTATAATTGCGCATATAGATCATGGCAAGTCCACTCTTGCTGATCGGCTGCTTGAGCTTACGGGGACTATTAAGAAGGGACATGGTCAACCTCAGTATCTTGACAAGTTGCAGGTAGAAAGAGAAAGGGGTATCACGGTTAAAGCCCAGACAGCAACAATGTTCTATAAGCACGGCATTGAGGAAACCACATCTAGTGACGACCAAGGTCCGGCAAACTTTCTGCTAAATCTTATCGACACTCCCGGGCACGTAGACTTCAGTTATGAAGTGTCGAGGTCACTGGCGGCTTGTCAGGGCGCTCTTTTGGTTGTTGATGCTGCTCAAGGAGTGCAGGCGCAAACTGTTGCTAATTTTTATCTTGCTTTTGAATCCAACCTAGCAATTATTCCCGTCATAAACAAAATAGACCAGCCAACTGCTGATCCTGATGGTGTTAAAGCACAACTAAAATCAATGTTTGATCTTGACCCAAGTGACGCACTTTTAACATCTGCTAAAACAGGACAGGGTCTTGAGCAAGTCCTTCCTGCTGTCATAGAGCGCATACCTCCACCTCCTGGGAAGAGTAGTTCTCCTCTACGCATGCTTTTGCTTGATTCTTATTATGATGAATACAAAGGGGTAATATGCCATGTTGCTATTGTTGATGGTGCCCTGCGCAAGGGGGATAAAATTTCATCAGCTGCAACTGGACAGGCTTATGAAGCTTTGGATGTAGGCATCATGCATCCTGAACTTAAATCTACTGGGATGTTGCTTACTGGACAAGTTGGTTATGTTGTAAGTGGCATGCGCTCAACCAAAGAGGCACGTGTTGGAGATACACTTTTCCATACCAGAAGCACTATAGAGCCCCTTCCAGGTTTTAAACCGGCAAAACATATGGTATTCTCTGGTCTTTATCCAGCAGATGGATCTGATTTTGAAGCTCTCAACCATGCAATAGAGAGATTGACATGCTTACTCCACATGGATGTTTTTCATCAGCGGCTTGAACAGGAGTATGGGGCTCATGTCATCTCAACTGTTCCAACTGTACCTTATATATTTGAGTATTCTGATGGAAGCAAATTGCAAGTTGAGAATCCTGCTGCATTACCCTCTAATCCCAAGCAACGAGTGACAACCTGTTGGGAACCAACAGTGATAGCTACAATTATCATCCCTAGTCAGTATGTGGGGTCTGTTATTACTCTTTGCTCTGAGAGAAGAGGGCAGCAATTGGAGTACTCATTCATTGACAGTCAACGGGCCTTCATGAAGTATCGCTTGCCTTTGAGGGAAATTGTTGTCGACTTTTACAATGAATTAAAGAGTCTAACATCAGGCTATGCTTCATTCGATTATGAGGATGCAGATTATCAGCAATCTGATCTGGTGAAACTTGACATTCTCTTGAATGGACAACCAGTTGATGCAATGGCAACCATTGTTCATAAGTTGAAAGCATATCGAGTTGGGCGTGAACTAGTGGAGAAATTGAAGAAAGTTATAGACAGGCAAATGTTTGAGATAACCGTACAAGCTGCTGTTGGGTCAAAAGTTATAGCAAGGGAGACGATTTCAGCTATGAGGAAAAATGTTCTTGCCAAGTGTTATGGCGGTGATGTTACTCGGAAGAGGAAGCTATTGGAGAAGCAAAAAGAAGGAAAGAAGCGAATGAAACGAGTTGGTTCCGTCGATATACCACAAGAGGCATTCCATGAATTATTGAAAGTTTCATGA 1968 0.4339 MGYLRRASKRLGQSRYLSLLFNSTPLSSIYGGISLELESRLICRRFALSRALFCSQPRQNSKENSRVDLTQYTPELIRNFCIIAHIDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHGIEETTSSDDQGPANFLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLAIIPVINKIDQPTADPDGVKAQLKSMFDLDPSDALLTSAKTGQGLEQVLPAVIERIPPPPGKSSSPLRMLLLDSYYDEYKGVICHVAIVDGALRKGDKISSAATGQAYEALDVGIMHPELKSTGMLLTGQVGYVVSGMRSTKEARVGDTLFHTRSTIEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLQVENPAALPSNPKQRVTTCWEPTVIATIIIPSQYVGSVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSLTSGYASFDYEDADYQQSDLVKLDILLNGQPVDAMATIVHKLKAYRVGRELVEKLKKVIDRQMFEITVQAAVGSKVIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1905 655 Gene3D Elongation Factor G (Translational Gtpase), domain 3 368 402 - -
Prci3g1905 655 CDD LepA 78 263 - -
Prci3g1905 655 SUPERFAMILY EF-G C-terminal domain-like 376 428 IPR035647 -
Prci3g1905 655 CDD EF4_II 274 359 - -
Prci3g1905 655 PANTHER TRANSLATION FACTOR GUF1-RELATED 51 401 IPR006297 GO:0005525
Prci3g1905 655 SUPERFAMILY EF-G C-terminal domain-like 459 553 IPR035647 -
Prci3g1905 655 FunFam Translation factor GUF1, mitochondrial 269 367 - -
Prci3g1905 655 PRINTS GTP-binding elongation factor signature 122 130 IPR000795 GO:0003924|GO:0005525
Prci3g1905 655 PRINTS GTP-binding elongation factor signature 173 184 IPR000795 GO:0003924|GO:0005525
Prci3g1905 655 PRINTS GTP-binding elongation factor signature 79 92 IPR000795 GO:0003924|GO:0005525
Prci3g1905 655 PRINTS GTP-binding elongation factor signature 157 167 IPR000795 GO:0003924|GO:0005525
Prci3g1905 655 PRINTS GTP-binding elongation factor signature 209 218 IPR000795 GO:0003924|GO:0005525
Prci3g1905 655 FunFam Elongation factor 4 74 268 - -
Prci3g1905 655 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 75 267 IPR000795 GO:0003924|GO:0005525
Prci3g1905 655 Pfam Elongation factor G C-terminus 459 545 IPR000640 -
Prci3g1905 655 Gene3D - 425 538 - -
Prci3g1905 655 NCBIfam small GTP-binding protein domain 79 255 IPR005225 GO:0005525
Prci3g1905 655 Gene3D - 75 268 IPR027417 -
Prci3g1905 655 CDD lepA_C 460 539 IPR035654 -
Prci3g1905 655 FunFam Translation factor GUF1, mitochondrial 539 613 - -
Prci3g1905 655 Gene3D Translation factors 269 367 - -
Prci3g1905 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 306 IPR027417 -
Prci3g1905 655 Pfam Elongation factor Tu GTP binding domain 77 264 IPR000795 GO:0003924|GO:0005525
Prci3g1905 655 Pfam GTP-binding protein LepA C-terminus 547 653 IPR013842 -
Prci3g1905 655 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 115 130 IPR031157 -
Prci3g1905 655 Hamap Elongation factor 4 [lepA]. 74 655 IPR006297 GO:0005525
Prci3g1905 655 Gene3D - 539 613 IPR038363 -
Prci3g1905 655 FunFam Translation factor GUF1, mitochondrial 425 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1905 Prci-Chr3 33520882 33526017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1905 77 218 Eukaryotic Initiation Factors Gene Family AT1G56070 40.972 2.75e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1905 K21594 - gmx:100781092 1088.56