Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1903 ATGGGTTATCTGAGGAGAGCTTCGAAGAGGCTAGGGCAGTCTAGGTACCTGTCCCTGTTGTTTAATTCAACCCCGTTGTCCTCCATTTACGGAGGCATATCATTAGAATTAGAAAGCAGACTAATTTGTCGTCGCTTTGCTCTAAGCCGTGCACTGTTCTGTTCTCAACCACGCCAAAACAGCAAAGAAAACAGTCGAGTAGATTTGACTCAATACACTCCAGAGCTAATTAGGAACTTCTGTATAATTGCGCATATAGATCATGGCAAGTCCACTCTTGCTGATCGGCTGCTTGAGCTTACGGGGACTATTAAGAAGGGACATGGTCAACCTCAGTATCTTGACAAGTTGCAGGTAGAAAGAGAAAGGGGTATCACGGTTAAAGCCCAGACAGCAACAATGTTCTATAAGCACGGCATTGAGGAAACCACATCTAGTGACGACCAAGGTCCGGCAAACTTTCTGCTAAATCTTATCGACACTCCCGGGCACGTAGACTTCAGTTATGAAGTGTCGAGGTCACTGGCGGCTTGTCAGGGCGCTCTTTTGGTTGTTGATGCTGCTCAAGGAGTGCAGGCGCAAACTGTTGCTAATTTTTATCTTGCTTTTGAATCCAACCTAGCAATTATTCCCGTCATAAACAAAATAGACCAGCCAACTGCTGATCCTGATGGTGTTAAAGCACAACTAAAATCAATGTTTGATCTTGACCCAAGTGACGCACTTTTAACATCTGCTAAAACAGGACAGGGTCTTGAGCAAGTCCTTCCTGCTGTCATAGAGCGCATACCTCCACCTCCTGGGAAGAGTAGTTCTCCTCTACGCATGCTTTTGCTTGATTCTTATTATGATGAATACAAAGGGGTAATATGCCATGTTGCTATTGTTGATGGTGCCCTGCGCAAGGGGGATAAAATTTCATCAGCTGCAACTGGACAGGCTTATGAAGCTTTGGATGTAGGCATCATGCATCCTGAACTTAAATCTACTGGGATGTTGCTTACTGGACAAGTTGGTTATGTTGTAAGTGGCATGCGCTCAACCAAAGAGGCACGTGTTGGAGATACACTTTTCCATACCAGAAGCACTATAGAGCCCCTTCCAGGTTTTAAACCGGCAAAACATATGGTATTCTCTGGTCTTTATCCAGCAGATGGATCTGATTTTGAAGCTCTCAACCATGCAATAGAGAGATTGACATGTAATGATGCTAGTGTCTCTATTACCAAAGAAAGTAGCATGGCCCTAGGTCTGGGGTTCAGGTGTGGTTTCTTAGGCTTACTCCACATGGATGTTTTTCATCAGCGGCTTGAACAGGAGTATGGGGCTCATGTCATCTCAACTGTTCCAACTGTACCTTATATATTTGAGTATTCTGATGGAAGCAAATTGCAAGTTGAGAATCCTGCTGCATTACCCTCTAATCCCAAGCAACGAGTGACAACCTGTTGGGAACCAACAGTGATAGCTACAATTATCATCCCTAGTCAGTATGTGGGGTCTGTTATTACTCTTTGCTCTGAGAGAAGAGGGCAGCAATTGGAGTACTCATTCATTGACAGTCAACGGGCCTTCATGAAGTATCGCTTGCCTTTGAGGGAAATTGTTGTCGACTTTTACAATGAATTAAAGAGTCTAACATCAGGCTATGCTTCATTCGATTATGAGGATGCAGATTATCAGCAATCTGATCTGGTGAAACTTGACATTCTCTTGAATGGACAACCAGTTGATGCAATGGCAACCATTGTTCATAAGTTGAAAGCATATCGAGTTGGGCGTGAACTAGTGGAGAAATTGAAGAAAGTTATAGACAGGCAAATGTTTGAGATAACCGTACAAGCTGCTGTTGGGTCAAAAGTTATAGCAAGGGAGACGATTTCAGCTATGAGGAAAAATGTTCTTGCCAAGTGTTATGGCGGTGATGTTACTCGGAAGAGGAAGCTATTGGAGAAGCAAAAAGAAGGAAAGAAGCGAATGAAACGAGTTGGTTCCGTCGATATACCACAAGAGGCATTCCATGAATTATTGAAAGTTTCATGA 2043 0.4347 MGYLRRASKRLGQSRYLSLLFNSTPLSSIYGGISLELESRLICRRFALSRALFCSQPRQNSKENSRVDLTQYTPELIRNFCIIAHIDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHGIEETTSSDDQGPANFLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLAIIPVINKIDQPTADPDGVKAQLKSMFDLDPSDALLTSAKTGQGLEQVLPAVIERIPPPPGKSSSPLRMLLLDSYYDEYKGVICHVAIVDGALRKGDKISSAATGQAYEALDVGIMHPELKSTGMLLTGQVGYVVSGMRSTKEARVGDTLFHTRSTIEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKESSMALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLQVENPAALPSNPKQRVTTCWEPTVIATIIIPSQYVGSVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSLTSGYASFDYEDADYQQSDLVKLDILLNGQPVDAMATIVHKLKAYRVGRELVEKLKKVIDRQMFEITVQAAVGSKVIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1903 680 CDD LepA 78 263 - -
Prci3g1903 680 Gene3D Elongation Factor G (Translational Gtpase), domain 3 368 449 - -
Prci3g1903 680 Pfam GTP-binding protein LepA C-terminus 572 678 IPR013842 -
Prci3g1903 680 CDD lepA_C 485 564 IPR035654 -
Prci3g1903 680 Gene3D - 450 563 - -
Prci3g1903 680 PANTHER TRANSLATION FACTOR GUF1-RELATED 51 679 IPR006297 GO:0005525
Prci3g1903 680 FunFam Translation factor GUF1, mitochondrial 564 638 - -
Prci3g1903 680 CDD EF4_III 375 450 - -
Prci3g1903 680 SUPERFAMILY EF-G C-terminal domain-like 376 453 IPR035647 -
Prci3g1903 680 Pfam Elongation factor G C-terminus 484 570 IPR000640 -
Prci3g1903 680 CDD EF4_II 274 359 - -
Prci3g1903 680 Gene3D - 75 268 IPR027417 -
Prci3g1903 680 FunFam Translation factor GUF1, mitochondrial 450 562 - -
Prci3g1903 680 FunFam Translation factor GUF1, mitochondrial 269 367 - -
Prci3g1903 680 Pfam Elongation factor Tu GTP binding domain 77 264 IPR000795 GO:0003924|GO:0005525
Prci3g1903 680 NCBIfam translation elongation factor 4 76 679 IPR006297 GO:0005525
Prci3g1903 680 Gene3D Translation factors 269 367 - -
Prci3g1903 680 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 75 267 IPR000795 GO:0003924|GO:0005525
Prci3g1903 680 FunFam Translation factor GUF1, mitochondrial 368 449 - -
Prci3g1903 680 Gene3D - 564 638 IPR038363 -
Prci3g1903 680 FunFam Elongation factor 4 74 268 - -
Prci3g1903 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 306 IPR027417 -
Prci3g1903 680 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 115 130 IPR031157 -
Prci3g1903 680 Hamap Elongation factor 4 [lepA]. 74 680 IPR006297 GO:0005525
Prci3g1903 680 PRINTS GTP-binding elongation factor signature 209 218 IPR000795 GO:0003924|GO:0005525
Prci3g1903 680 PRINTS GTP-binding elongation factor signature 157 167 IPR000795 GO:0003924|GO:0005525
Prci3g1903 680 PRINTS GTP-binding elongation factor signature 173 184 IPR000795 GO:0003924|GO:0005525
Prci3g1903 680 PRINTS GTP-binding elongation factor signature 122 130 IPR000795 GO:0003924|GO:0005525
Prci3g1903 680 PRINTS GTP-binding elongation factor signature 79 92 IPR000795 GO:0003924|GO:0005525
Prci3g1903 680 NCBIfam small GTP-binding protein domain 79 255 IPR005225 GO:0005525
Prci3g1903 680 SUPERFAMILY EF-G C-terminal domain-like 484 578 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1903 Prci-Chr3 33520882 33526017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1903 77 218 Eukaryotic Initiation Factors Gene Family AT1G56070 40.972 3.22e-23 103