Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1881 ATGAGGAAACGTCAAGTTGTGGTGAGAAGAGAAGAGCCTGCTCGGAGCTCAAGCTCTTCATCTTTTACTGTTAGGAGTGTGAGATATGGAGAGTGCCAGAAGAATCATGCGGCTAACGTCGGAGGATACGCCGTGGACGGCTGCCGCGAGTTCATGGCCAGTGGAGATGAAGGCACAACTTCTGCTCTGACCTGTGCTGCCTGTGGCTGCCACAGGAACTTCCACAAAAGAGAGATGGAGACTGAAGTAGTGAGTGAGTGCTCTTCACCTACATCCAACGGGGCTTGA 288 0.5243 MRKRQVVVRREEPARSSSSSSFTVRSVRYGECQKNHAANVGGYAVDGCREFMASGDEGTTSALTCAACGCHRNFHKREMETEVVSECSSPTSNGA 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1881 95 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 29 78 IPR006456 -
Prci3g1881 95 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 82 - -
Prci3g1881 95 MobiDBLite consensus disorder prediction 1 20 - -
Prci3g1881 95 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 28 78 IPR006456 -
Prci3g1881 95 Pfam ZF-HD protein dimerisation region 27 79 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1881 Prci-Chr3 33315058 33315756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1881 1 94 Zinc finger-homeobox gene family AT3G28917 73.737 2.08e-43 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci3g1881 ZF-HD_dimer 2.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1881 - - vvi:100262881 155.221