Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1873 ATGTCTTCACGGCCTAACTCGCCGGAATTACCCTCCTCCCCGGCCGCTGACGAATTGGACGACCTCCAGATTCGAAGGCTCACCCTGCTTCTTCCTTTCATTTTCAGGTTAGCTGCTCACAGTGATCACAACCGCCATTACGACGACACCCTCCTCGATCTTGCCCTCCGGGTCATCCTCTTTAACCCTGCCACCGGATCTACCACCGTCATGATCGACCGCTCCCTCGACTTGGACTCGCTGCTCGAGGAGGCTCCCTCGAAGTCCTGGTTGTTGCCCGCCTCCAAGGATTCCATGGCGGCCATGCCCACCGTCGTCATCACCGACCAAGATTCACAGTGTGCGGTTTGCTTGGAAGATTACGAGGTCGGGGACGAGGCTAGGGAGATGCCTTGCATGCATAGATTTCACTCTCGCTGCATCGAGAAGTGGCTAGGCATTCACGGCGCGTGTCCCATTTACCGATTCCCGATGCCCCTAGCTGATGGGGATGAGGAGCTTGATGATGACGCAACGGCGGAGAGTAACGATGACCTCATGCAAGCGGGTTTCGTAACCTGA 561 0.5686 MSSRPNSPELPSSPAADELDDLQIRRLTLLLPFIFRLAAHSDHNRHYDDTLLDLALRVILFNPATGSTTVMIDRSLDLDSLLEEAPSKSWLLPASKDSMAAMPTVVITDQDSQCAVCLEDYEVGDEAREMPCMHRFHSRCIEKWLGIHGACPIYRFPMPLADGDEELDDDATAESNDDLMQAGFVT 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1873 186 PANTHER SI:CH211-59O9.10 77 158 - -
Prci3g1873 186 SUPERFAMILY RING/U-box 108 158 - -
Prci3g1873 186 ProSiteProfiles Zinc finger RING-type profile. 114 155 IPR001841 -
Prci3g1873 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 160 IPR013083 -
Prci3g1873 186 SMART ring_2 114 154 IPR001841 -
Prci3g1873 186 FunFam E3 ubiquitin-protein ligase RNF181 82 161 - -
Prci3g1873 186 Pfam Ring finger domain 113 153 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1873 Prci-Chr3 33161502 33162062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1873 22 165 C3H Transcription Factor Family AT1G26800 40.411 3.66e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1873 - - pcin:129305525 360.533