Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1859 ATGGAGAGATCCTCAGGAGTGAGAACTGGCAGGTGGTGTAAAGAAGAAGATGACCTTCTCAAGGACTGTGTTCTCAAGTACGGCGAAGGAAACTGGCACCTTATTCCTCGGAGATCAGGCTTGAAGAGATGCAGAAAGAGCTGTAGGCTGAGGTGGTTAAACAACCTGAAACCGGATATCAAGAGAGGAGACTTCTCTGTGGATGAAATTGATATGATGATCAGGCTTCACAGACTCTTGGGTAACAGATGGTCACTGATAGCTGGAAGGCTTCCTGGAAGAACACCAAATGATGTGAAAAACTACTGGAACACCCATACACGGGAGAAGGGACGACATTATGTTTCATCTCAGAAGAGAGAGTTGGAAGAAAAATCAGAGGAAGTAACCATGAGAAGGCATAGACAAACAGTAATAAAACCTCGAGCTTTCAGGTTATCATCAAGAGGCTCGTGGTCGTGTAGGTGGAGAAAGAAACCAGCTAATAACGGCGTTGAAGTTAGCGAAGACACGAGTACAAGCAGCAATGGCCCAGATGAACAGAAAAACCAGCAGGAAGATGAGAATTCGGTGGAGTACTGGTGGAAATGGTTGCTTCTTGATGATAATGACAATAATATTGATGAGAAGGCAGGTCAAGATCAAATTGACTCGTCGTTTTCATCCATATCATCATCTGTTTCCACGGAGCAAAATGGCACGTTTGACTCCCTCTGGGATGAGCAACTTAGTTGGATTAATAACTTTCCTCTGCACACCAGCCTCACGGATTTTCTAGATTAA 783 0.4432 MERSSGVRTGRWCKEEDDLLKDCVLKYGEGNWHLIPRRSGLKRCRKSCRLRWLNNLKPDIKRGDFSVDEIDMMIRLHRLLGNRWSLIAGRLPGRTPNDVKNYWNTHTREKGRHYVSSQKRELEEKSEEVTMRRHRQTVIKPRAFRLSSRGSWSCRWRKKPANNGVEVSEDTSTSSNGPDEQKNQQEDENSVEYWWKWLLLDDNDNNIDEKAGQDQIDSSFSSISSSVSTEQNGTFDSLWDEQLSWINNFPLHTSLTDFLD 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1859 260 Gene3D - 2 62 - -
Prci3g1859 260 MobiDBLite consensus disorder prediction 163 187 - -
Prci3g1859 260 CDD SANT 65 106 IPR001005 -
Prci3g1859 260 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Prci3g1859 260 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Prci3g1859 260 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Prci3g1859 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 60 IPR017930 -
Prci3g1859 260 CDD SANT 11 56 IPR001005 -
Prci3g1859 260 SMART sant 61 109 IPR001005 -
Prci3g1859 260 SMART sant 8 58 IPR001005 -
Prci3g1859 260 Gene3D - 64 139 - -
Prci3g1859 260 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 208 - -
Prci3g1859 260 FunFam Myb transcription factor 9 61 - -
Prci3g1859 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Prci3g1859 260 MobiDBLite consensus disorder prediction 165 180 - -
Prci3g1859 260 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Prci3g1859 260 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1859 Prci-Chr3 32983133 32986078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1859 2 202 MYB Transcription Factor Family AT1G66370 46.226 3.93e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci3g1859 Myb_DNA-binding 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1859 - K09422 adu:107471154 204.142