Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1852 ATGGCAGCTCGTGTAATCACGGTCTCACAGACCGGAAGCGGAGACTATCTGACGGTGCAGGAAGCAATTGATGCCATCCCACTGGGAAACAACCGTCGGACGGTGATTCGAGTGTCTCCGGGAATCTACAAGCAGCCGGTGTACGTGCCCAAGACTAAGAATTTCATCACACTGGCTGGTCTGTGCCCGGAGGATACTGTGCTTACCTGGAACAATACCGCCATCAGAATCGAGCACCACCAGGCTGCCCGGGTAATAGGCACGGGTACTTTTGGCTGTGGTAGTACCATTGTGGAAGGAGAGGACTTTATTGCCGAAAACATCACGTTCGAGAATTCGTCCCCTCAGGGTTCAGGGCAAGCGGTGGCAATTAGAGTGACAGCAGATCGATGTGCCTTCTATAACTGCAGGTTCCTGGGATGGCAGGACACTTTGTACTTACACTATGGCAAACAGTACTTGAAAGATTGTTATATTGAAGGAAGTGTGGACTTTATTTTTGGCAATAGCACTGCTCTTTTGGAACATTGCCATATTCACTGCAAGTCTGAAGGCTTCATAACTGCACAGAGCAGAAAATCTTCTCATGAAACAACTGGATATGTATTCCTAAGATGTGTCATAACGGGTAATGGAGATACTTCATACGCATATCTTGGACGACCATGGGGACCTTTTGGAAGAGTGATCTTTGCGTACACCTATATGGATCGATGTATAAGGCCTCATGGCTGGAATAATTGGGATAAAATTGAGAATGAGAGAACTGCTTGCTTTTATGAATACAGATGTTATGGACATGGTTGCTGTCCATCCAAACGAGTAGCGTGGGCTAGAGAATTGATAAATGAAGAAGCAGAGCAGTTCCTCTCGCATCGTTTCATTGACCCAGATGCTAATAGACCTTGGCTTGCCCAGAGAATGGCTTTGAGGATTCCATATTCTGCTTAG 951 0.4658 MAARVITVSQTGSGDYLTVQEAIDAIPLGNNRRTVIRVSPGIYKQPVYVPKTKNFITLAGLCPEDTVLTWNNTAIRIEHHQAARVIGTGTFGCGSTIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSHETTGYVFLRCVITGNGDTSYAYLGRPWGPFGRVIFAYTYMDRCIRPHGWNNWDKIENERTACFYEYRCYGHGCCPSKRVAWARELINEEAEQFLSHRFIDPDANRPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1852 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 303 - -
Prci3g1852 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
Prci3g1852 316 Gene3D - 1 310 IPR012334 -
Prci3g1852 316 FunFam Pectinesterase 2 309 - -
Prci3g1852 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Prci3g1852 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1852 Prci-Chr3 32934897 32938896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1852 4 309 Carbohydrate Esterase AT5G47500 38.924 4.08e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1852 K01051 - tcc:18601567 590.882