Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1847 ATGGCCACGAAGAACGGCGGATCCGCCACGGCACCGCCTCGTCCGACGATCACTCTCCCACCTCGGCCTTCCATGGAGGCCTTCTTCTCCGGGGGGCCAGGCGCAAGCCCTGGTCCGATGACACTCGTATCCAGCTTCTTCACGGATAATTACCCTGACTCTGACTTTCGGTCCTTTTCTCAGTTACTCGCCGGAGCTATGGCTTCTCCGCTTGCTCTCGGTGCGAGGCCCAGCTTGTTCCCGGAAAATTCCACGGACAATTCCTCCAAAGAAGCTACTGCTGAGGATCGGGGCCAGAAGAATTCGGGTTTTAAGCAGAGTAGACCCATGAATCTGGTTATTGCGCGTTCACCATTGTTCACCGTTCCACCTGGGTTCAGCCCTTCTGGGTTGCTTAACTCACCGGGTTTCTTTCAGCCGCAGAGCCCCTTTGGGATGTCCCATCAGCAGGCTTTGGCACAGGTTCAGGCTCAAGCTGCCTTGGCACAATCTCATTTGCATATGCAAGGTGATCATCAACAATCTGCCATTACAGCTGCTGGTGAACCATTGATAGTACAGCAGGCATCTTTTGTTCCAAGTGAAGCTTCAGACCAGCAAGTGGCACCATCTGCATCAGATTCTAGAAGTGCTCAAATGGAGACTTCAGATATTTCTCACACTGATAAGAAATATCAACTGTCTTCCTTAGCCATTGATAAACCTGCAGATGATGGCTACAATTGGCGTAAGTATGGGCAGAAGCAGGTTAAAGGGAGTGAGTACCCACGGAGCTACTACAAGTGTACACATCTGAATTGCCCTGTAAAGAAGAAGGTTGAGCGTGCTCCTGATGGGCACATTATTGAAATTATATATAAAGGCCAGCATAATCATGAACTGCCTCAGCCAAACAAGCGTACTAAAGATAATTCTGATTTAAATGGAAATACAAACATTCAAGTTCAGTCTGACTCGACTACACAAGGCTGGGTGGGAAATTTAAAGAAGTTTGGTGAAAGTGTGCCTGATCATTCAGTGCCAGAGAGTGATCCCTCATCTAATCAAGGTGCTCACAGGCAACTAACTGGATCAAGTGAGAGTGAGGAAGGGGGTGGTGGTGATATAAGGGAAGAGGAGGGAGACGTCAGTGAGCCAAACCCCAAGAGAAGGAACACTGATCCTGTGACTTCTGAAGCACCTGTGTCTCACAAGACTGTTACAGAACCCAAAATCATTGTGCAAACAAGAAGTGAAGTTGATCTTCTGGATGATGGCTACAGGTGGCGCAAGTATGGGCAAAAAGTGGTAAAAGGAAATCCCTATCCAAGGAGTTATTACAAATGCACCAGTGCAGGATGCAATGTGCGTAAGCATGTTGAAAGGGCTTCAACAGACCCCAAGGCTGTCATAACTACCTACGAGGGAAAACATAACCATGATGTTCCTGCTGCTAAGACCAGCAGCCATAACACAGCCACCAGCAATTCAATGCCAGTAAAACCACAGAGAGTGGTGCCTGAAAAACATCCTTTGCTTAAAGATATGGATTTTGGAAATAATGGCCAAAGACCGGTTGCTTTACGCTTGAAAGAGGAGCAAATCATAGTATAG 1593 0.4777 MATKNGGSATAPPRPTITLPPRPSMEAFFSGGPGASPGPMTLVSSFFTDNYPDSDFRSFSQLLAGAMASPLALGARPSLFPENSTDNSSKEATAEDRGQKNSGFKQSRPMNLVIARSPLFTVPPGFSPSGLLNSPGFFQPQSPFGMSHQQALAQVQAQAALAQSHLHMQGDHQQSAITAAGEPLIVQQASFVPSEASDQQVAPSASDSRSAQMETSDISHTDKKYQLSSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHIIEIIYKGQHNHELPQPNKRTKDNSDLNGNTNIQVQSDSTTQGWVGNLKKFGESVPDHSVPESDPSSNQGAHRQLTGSSESEEGGGGDIREEEGDVSEPNPKRRNTDPVTSEAPVSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHNTATSNSMPVKPQRVVPEKHPLLKDMDFGNNGQRPVALRLKEEQIIV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1847 530 MobiDBLite consensus disorder prediction 193 226 - -
Prci3g1847 530 SUPERFAMILY WRKY DNA-binding domain 234 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1847 530 FunFam WRKY transcription factor 33 403 469 - -
Prci3g1847 530 FunFam WRKY transcription factor 223 296 - -
Prci3g1847 530 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 134 490 IPR044810 GO:0003700
Prci3g1847 530 SUPERFAMILY WRKY DNA-binding domain 408 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1847 530 Gene3D WRKY domain 222 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1847 530 Gene3D WRKY domain 401 477 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1847 530 Pfam WRKY DNA -binding domain 417 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1847 530 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1847 530 ProSiteProfiles WRKY domain profile. 231 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1847 530 MobiDBLite consensus disorder prediction 1 34 - -
Prci3g1847 530 MobiDBLite consensus disorder prediction 287 403 - -
Prci3g1847 530 MobiDBLite consensus disorder prediction 473 495 - -
Prci3g1847 530 MobiDBLite consensus disorder prediction 340 361 - -
Prci3g1847 530 MobiDBLite consensus disorder prediction 383 403 - -
Prci3g1847 530 MobiDBLite consensus disorder prediction 193 215 - -
Prci3g1847 530 MobiDBLite consensus disorder prediction 301 327 - -
Prci3g1847 530 ProSiteProfiles WRKY domain profile. 411 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1847 530 MobiDBLite consensus disorder prediction 77 107 - -
Prci3g1847 530 MobiDBLite consensus disorder prediction 478 494 - -
Prci3g1847 530 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1847 530 SMART WRKY_cls 416 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1847 Prci-Chr3 32893202 32898230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1847 8 528 WRKY Transcription Factor Family AT2G03340 52.514 1.29e-151 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g1847 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1847 - - qsa:O6P43_004445 759.985