Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1842 ATGCCCGCTCTCTTCTTTCTCCCTAGGTGCTTGGGAAGTCATTCAACTAGTAGTCGAAGCGGCGGCGATAGTGGCATCGACGTCGTCGCCGATGACAGCAGTCCGAACACCAGCTCATCCGTCGAGTGCTATGCCTGCACTCAGGTGGGCGTCCCTGTCTTCCACTCCACCAGCTGCGACAGCTATCATCCGCCGCAATGGGAGGCTTCCGCGGGTTCTTCCTTAATCCCTATCCAGTACAAAACCACGGCGAAGAATCTGAGGCAACGGCCCAAATCGGGGCCACTCGGGCGAGTGTTGGACCCGAGGAGCAAGCGCGTGCAGAGTTGGAACAGGGCGTTGCTGCTGGCGCGAGGGCTGGCGCTGGCGGTGGACCCCCTGTTCTTCTACGCGCTGTCGATAGGGAGGGACGGGACGCCGTGCCTGTACATGGACGGAAGTTTAGCGGCGATAGTGACGGTGTTGAGGACGTTGGTGGACGTGGTTCACGTGATCCACATGTGGTTGCAGTTCAGGCTGGCTTACGTGTCGAAGGAGTCGATGGTGGTTGGGTGTGGGAAGCTGGTGTGGGACGCCCGTGCCATCGCCGCGCATTACCTGAGATCCTTCAGAGGCTTCTGGTTCGATGCCTTTGTGATAATTCCCGTTCCTCAGGCAGTGTTTTGGCTGATACTTCCAAAATTGATAAGAGAAGAGAAAATTAAAATCATAATGACGATAATGCTATTGATCTTCTTGTTTCAATTTCTTCCCAAGGTTTACCACAGCATCTGCATGATGAAGGGGATGCAAAAAGTCACGGGCTATATCTTCGGCACCATTTGGTGGGGCTTTGGCCTCAATCTCTTAGCTTACTTTATTGCTTCTCACGTAGCAGGAGGGTGCTGGTATGTGCTCGCAATTCAACGTGTAGCGTCGTGCCTCAGGCAGCAGTGTGAAAGAGGGTATGGGTGCGATCTCCCTCTGTCTTGTTCAGATGAAGTGTGTTACAAGTTTCTGTCACCAACAGGCACGCAAGGAACCTCGTGCAATGGAAACTCCACAGTGGTGGCAAGAAAGCCACTGTGTTTAGATGTGAAAGGACCTTTTAAATATGGCATCTACCAATGGGCTCTGCCTGTCATTTCCAGCAACTCTTTGGCTGTCAAGATTCTTTATCCTATATTTTGGGGTTTGATGACCCTAAGCACTTTTGGCAATGATCTTGAGCCCACGAGTAACTGGCTTGAAGTGATTTTCAGCATATGCATCGTACTCAGCGGACTAATGCTCTTCACTCTGTTGATTGGTAACATCCAGGTTTTCTTACACGCAGTAATGGCGAAGAAAAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAACTTCCGTCCCGTTTAAGACGGAGAGTTCGCCAGTTCGAACGCCAGAGATGGGCGGCCATGGGAGGAGAGGACGAAATGGATATGATCAAAGACTTTCCTGAAGGACTGAGGAGAGACATCAAGCGTTATCTTTGCTTAGACCTCATAAAAAAGGTACCTCTGGTTCATAACTTGGATGATCTTATCCTTGACAACATCTGCGATAGGGTTAAACCCCTAGTCTTCTCCAAAGATGAAAAGATTATCAGAGAAGGGGACCCAGTGCCAAGAATGGTGTTTATGGTTCGCGGGCGCATAAAACGCATCCAAAGTCTAAGCAAAGGCATGGTGGCCACAAGCATCATCGAAGCTGGGGGGTTTTTGGGGGACGAGCTTCTCTCATGGTGCCTTCGCCGGCCATTCCTCGACCGACTTCCGTCATCATCTGCCACGTTCATATGCCTGGAATCAGCAGAAGCCTTTGGTTTGGAGGCAGATCACCTCAAGTATGTGACGGACCACTTCAGGTACAAATTCGCAAACGAGAGGCTAAAGAGAACGGCGAGATATTACTCATCTAATTGGAGAACGTGGGCTGCCGTCAACATACAATTTGCATGGCGGCGATACAGGCAGAGGACACGAGGTCCGGTGACCCCTGTGATCGAAGATGGAGGAAGCAGTAGCACTGAACGCAGGCTTTTGCAGTACGCTGCCATGTTCATGTCATTAAGGCCGCATGACCACCTTGAGTGA 2118 0.5118 MPALFFLPRCLGSHSTSSRSGGDSGIDVVADDSSPNTSSSVECYACTQVGVPVFHSTSCDSYHPPQWEASAGSSLIPIQYKTTAKNLRQRPKSGPLGRVLDPRSKRVQSWNRALLLARGLALAVDPLFFYALSIGRDGTPCLYMDGSLAAIVTVLRTLVDVVHVIHMWLQFRLAYVSKESMVVGCGKLVWDARAIAAHYLRSFRGFWFDAFVIIPVPQAVFWLILPKLIREEKIKIIMTIMLLIFLFQFLPKVYHSICMMKGMQKVTGYIFGTIWWGFGLNLLAYFIASHVAGGCWYVLAIQRVASCLRQQCERGYGCDLPLSCSDEVCYKFLSPTGTQGTSCNGNSTVVARKPLCLDVKGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRRRVRQFERQRWAAMGGEDEMDMIKDFPEGLRRDIKRYLCLDLIKKVPLVHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFMVRGRIKRIQSLSKGMVATSIIEAGGFLGDELLSWCLRRPFLDRLPSSSATFICLESAEAFGLEADHLKYVTDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPVTPVIEDGGSSSTERRLLQYAAMFMSLRPHDHLE 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1842 705 MobiDBLite consensus disorder prediction 13 33 - -
Prci3g1842 705 CDD CAP_ED 518 622 IPR000595 -
Prci3g1842 705 Gene3D Jelly Rolls 513 631 IPR014710 -
Prci3g1842 705 Gene3D Helix hairpin bin 441 506 - -
Prci3g1842 705 Pfam Ion transport protein 109 433 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci3g1842 705 SUPERFAMILY cAMP-binding domain-like 442 629 IPR018490 -
Prci3g1842 705 SUPERFAMILY Voltage-gated potassium channels 101 437 - -
Prci3g1842 705 ProSiteProfiles cAMP/cGMP binding motif profile. 515 594 IPR000595 -
Prci3g1842 705 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 89 668 - -
Prci3g1842 705 Gene3D - 139 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1842 Prci-Chr3 32797456 32801164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1842 39 705 Ion Channels AT5G15410 76.923 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1842 K05391 - qsa:O6P43_004432 1135.17