Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1829 ATGGACTACACCACTGTGCCTGGATTGCAGCCAAATCCAACGCCAGCGCCCCTGTCTTCTTACCCACAATCTGTAGCCACTTATTTTCCTGCATCCTGTCCTCCCCATTATCAATTATACCTTCAAAACCCTAATCCTTCTTCTGTAGACCCTCAACCTCAATCTTCTATTGCGACTCAAGAATTTCACTGTGGCACGGCCGCGGAATCTGGGGTGAACCCTCCTGCTGTTCCTTCCTATGCCCCCTTGGCCTCCAATTTAGTTGGCCATCTGACTCATGAAGCCCATGCTGATTACTCGTATGCTCACAACCCTATTGCAGATTCGAGTTCCGGATACTATTTTGACCCAAATGTTCTGAATTGGGCTGCTAGGGAGGCCGTTAGGCAGTTCGGGGCAGACCCGCTTGGCTATGGAGCTGCTATCCCCGTGGCTTCAACTGGATCAGAGCAATTATCTACTGCAAATACTAACTCCGCATGGTGGGCCAACACAACAACTCAACCTCATGGAAATGGGGCATGGAAGAAACGCCCAAAGAAACCAAAAACTAAGGTTGTCCAATCTGCATATTGTGAAGTTTGCAAGATAGATTGTACCAGCAAGGATGTTCTGGACCAGCATAAGTTAGGAAAGAAGCACAAGAAGAACTTGGAGAAACTAAAAGAAGCATTAAGGCCACCACAAGTTCCCGTTTCACCCGCAGCATCATCTAATCCAGTGATAGGACCTCAACCGGCAGCATCTAATCCAGTGATAGTACCTCAAGCGGTGGGGGTGAAGAGCAAATCTGGTGGTAAGGGTAAAAGGAAAGCGATTGAAACACCAGAAGATTTGGAGAAAAAGAAAAAGAAGGTTCTTGAAGGTGGGGCAGCCGCAGAAGCAGTTAAAATCTGTACAATATGTAATGTGGTCTGTAATAGCGAGACGGTATTTAATTATCATCTTGCAGGGCAAAAGCATGCTGCTATGATGAAGAAACAAGCTTCTTAA 993 0.4653 MDYTTVPGLQPNPTPAPLSSYPQSVATYFPASCPPHYQLYLQNPNPSSVDPQPQSSIATQEFHCGTAAESGVNPPAVPSYAPLASNLVGHLTHEAHADYSYAHNPIADSSSGYYFDPNVLNWAAREAVRQFGADPLGYGAAIPVASTGSEQLSTANTNSAWWANTTTQPHGNGAWKKRPKKPKTKVVQSAYCEVCKIDCTSKDVLDQHKLGKKHKKNLEKLKEALRPPQVPVSPAASSNPVIGPQPAASNPVIVPQAVGVKSKSGGKGKRKAIETPEDLEKKKKKVLEGGAAAEAVKICTICNVVCNSETVFNYHLAGQKHAAMMKKQAS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1829 330 Gene3D Classic Zinc Finger 274 329 - -
Prci3g1829 330 Gene3D Classic Zinc Finger 174 221 - -
Prci3g1829 330 SUPERFAMILY beta-beta-alpha zinc fingers 180 222 IPR036236 -
Prci3g1829 330 SUPERFAMILY beta-beta-alpha zinc fingers 295 328 IPR036236 -
Prci3g1829 330 PANTHER ZINC FINGER PROTEIN 385B-LIKE 116 329 - -
Prci3g1829 330 MobiDBLite consensus disorder prediction 221 248 - -
Prci3g1829 330 SMART ZnF_U1_5 187 221 IPR003604 GO:0003676|GO:0008270
Prci3g1829 330 SMART ZnF_U1_5 294 328 IPR003604 GO:0003676|GO:0008270
Prci3g1829 330 SMART c2h2final6 297 321 IPR013087 -
Prci3g1829 330 SMART c2h2final6 190 214 IPR013087 -
Prci3g1829 330 Pfam Zinc-finger of C2H2 type 298 321 - -
Prci3g1829 330 Pfam Zinc-finger of C2H2 type 191 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1829 Prci-Chr3 32644759 32647399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1829 186 325 C2H2 Transcription Factor Family AT5G61190 31.915 4.74e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1829 - - qsa:O6P43_009136 306.605