Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1814 ATGGCATTCATCAATAAGATTGGAAAGCTTCTCAAGCATTCTGCTGTCAAATGCATCAGCCCGGAATTTTCTGCATCTACTCCATCGGTTTATCAGGCAATCAGGTCCATGTCATCTGCAAAGCTTTTTATTGGAGGTGTTTCATATAGCACAGACGATATGGGTCTGAGAGAAGCCTTTGCTCGCTATGGAGAGATAATTGATGCAAGGATAATTATGGATCGTGAGACTGGAAGGTCAAGAGGATTTGGGTTCGTAACTTTCACGTCAGGTGAGGAGGCATCTGCCGCTATTCAGGCAATGGATGGTCAGGATCTTCATGGTCGGAGGATACGGGTAAACTATGCTACAGATAGGTCGCGTCCAAGCTTTGGTGGCGGGGGCTATGGTGGGGGCTATGGCGGGGGCTATGGCAGAAGTGACTATGGAGGTGATAATAACTATAGGAATCCAGGTTATGGAAGCAGTGGTGATGGTTTTGGGGGCAGTGGAAATTATGGTGTTACTGATGGTACTGGTGGCAGTAATTACCAATTCAATCACAACCCAGGTGAAGATCTTGGCTTTGAACCGAGTGGCAATTCAAGTATGGGAGATGGTGGTGGCCAATTTGGTGGCAACCAAAATGAAGGAACTGGCATGGACGATGAAGATAACTTGACAGGGAACAATGGTGAAGACAACTGGAGAGAGAGCCGGTAG 702 0.4701 MAFINKIGKLLKHSAVKCISPEFSASTPSVYQAIRSMSSAKLFIGGVSYSTDDMGLREAFARYGEIIDARIIMDRETGRSRGFGFVTFTSGEEASAAIQAMDGQDLHGRRIRVNYATDRSRPSFGGGGYGGGYGGGYGRSDYGGDNNYRNPGYGSSGDGFGGSGNYGVTDGTGGSNYQFNHNPGEDLGFEPSGNSSMGDGGGQFGGNQNEGTGMDDEDNLTGNNGEDNWRESR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1814 233 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 36 202 - -
Prci3g1814 233 SMART rrm1_1 41 114 IPR000504 GO:0003723
Prci3g1814 233 MobiDBLite consensus disorder prediction 168 182 - -
Prci3g1814 233 MobiDBLite consensus disorder prediction 164 233 - -
Prci3g1814 233 FunFam Glycine-rich RNA-binding protein 3, mitochondrial 12 138 - -
Prci3g1814 233 Gene3D - 28 157 IPR012677 -
Prci3g1814 233 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Prci3g1814 233 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Prci3g1814 233 SUPERFAMILY RNA-binding domain, RBD 25 147 IPR035979 GO:0003676
Prci3g1814 233 CDD RRM2_NsCP33_like 41 116 - -
Prci3g1814 233 PRINTS Eggshell protein signature 153 163 - -
Prci3g1814 233 PRINTS Eggshell protein signature 200 218 - -
Prci3g1814 233 PRINTS Eggshell protein signature 123 138 - -
Prci3g1814 233 PRINTS Eggshell protein signature 36 52 - -
Prci3g1814 233 MobiDBLite consensus disorder prediction 196 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1814 Prci-Chr3 32481274 32484347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1814 42 120 Eukaryotic Initiation Factors Gene Family AT4G34110 32.911 1.13e-07 50.1