Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1809 ATGAACCAAAAACACATCTTTCTTCATTTGGCGCTCGTCTGCTTCATGGTGGCGCTCAGAGCAAGTGACGGTAATACAGAAGCAGAAGCATTGGTGAGATCAGAAGAAGAAGCTGACAGGATCGTGGAACTTCCCGGGCAGCCCAGAGTGTGGTTCCAACAATTCTCAGGCTACGTCACTGTCAATCACGTTGCTGGTCGAGCCCTCTTTTACTGGCTCACCGAATCCCCTCACAACCCCTCCTCCAAGCCCCTCGTCATTTGGCTCAATGGAGGTCCGGGTTGTTCATCGGTGGCGTACGGAGCATCCGAGGAGATAGGCCCATTCAGGATCAATAAAACTGCTTCGGGGCTATACCTTAACAAGTTCTCCTGGAACTCCGTCGCCAACCTCCTCTTTCTGGAAGCTCCGGCCGGCGTCGGCTTCTCCTACTCCAACCGCTCCTCCGATCTCTTCGACACCGGCGACCGCCGCACTGCGAAGGACTCTCTGCAATTCATAATCAGGTGGCTAGAACGATTCCCGCGGTACAAGAATCGGGAACTTTATATCAGTGGGGAGAGCTACGCAGGCCATTACGTCCCTCAATTAGCTAGACAAATCATCACGTATAATGCAAAGGCTAAGCACCCAATCAATATCAAAGGAATTTTGGTTGGGAATGCAGTGACGGACAATTACTATGATAACCTGGGGACGGTGACGTATTGGTGGAGCCACGCTATGATCTCCGATCAGACTTACCGGCAGCTCATGAGCACCTGCGATTTCCACCGGCAAAAGGAATCCGATGAGTGCGAGTCCCTGTATAGCTACGCCATGGACCAAGAATTTGGAAACATTGACCAGTATAACATCTACGCGCCACCATGCAACAACTCTGATGGCAGCTCCGCCGCCACCCGCCGCTCCATGCGGTTGCCCCACCGTCCTCATCATCCGGTATTTAGGCAAATGTCTGGGTATGATCCGTGTACAGAGAAGTATGCAGAGATATACTATAACAGGCCAGATGTTCAGAAAGCACTCCATGCCAACATCACGGCTATTCCTTACAAGTGGACTGCTTGCAGTGAGGTTTTGAATCGGAACTGGAACGATACAGATGTGTCCATACTTCCCATTTACAGAGAGTTGATAGCTCATGGAACCAGAGTCTGGGTTTTCAGTGGGGATGTTGATTCGGTGGTGCCGGTTACAGCAACAAGATATTCCCTTGCACAGCTGAAGTTGGCGACCAAGATTCCATGGTATCCTTGGTACGTCAAGAAGCAGGTTGGAGGGTGGACAGAGGTATACGAGGGGCTCACGTTCGCTACAGTTAGAGGGGCAGGTCATGAAGTGCCACTGTTCAAGCCCGGAGCAGCTCTTCAGCTGTTCAAATCATTCATTGCAGGAAAGCCTCTTCCGAAGTCCTGA 1419 0.513 MNQKHIFLHLALVCFMVALRASDGNTEAEALVRSEEEADRIVELPGQPRVWFQQFSGYVTVNHVAGRALFYWLTESPHNPSSKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKFSWNSVANLLFLEAPAGVGFSYSNRSSDLFDTGDRRTAKDSLQFIIRWLERFPRYKNRELYISGESYAGHYVPQLARQIITYNAKAKHPINIKGILVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLMSTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSAATRRSMRLPHRPHHPVFRQMSGYDPCTEKYAEIYYNRPDVQKALHANITAIPYKWTACSEVLNRNWNDTDVSILPIYRELIAHGTRVWVFSGDVDSVVPVTATRYSLAQLKLATKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPGAALQLFKSFIAGKPLPKS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1809 472 FunFam Carboxypeptidase 35 293 - -
Prci3g1809 472 SUPERFAMILY alpha/beta-Hydrolases 37 470 IPR029058 -
Prci3g1809 472 FunFam Carboxypeptidase 321 469 - -
Prci3g1809 472 ProSitePatterns Serine carboxypeptidases, histidine active site. 436 453 IPR033124 GO:0004185
Prci3g1809 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 42 453 IPR001563 GO:0004185|GO:0006508
Prci3g1809 472 Pfam Serine carboxypeptidase 49 465 IPR001563 GO:0004185|GO:0006508
Prci3g1809 472 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Prci3g1809 472 Gene3D - 325 362 - -
Prci3g1809 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Prci3g1809 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Prci3g1809 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Prci3g1809 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Prci3g1809 472 Gene3D - 372 466 - -
Prci3g1809 472 Gene3D alpha/beta hydrolase 35 293 IPR029058 -
Prci3g1809 472 FunFam Carboxypeptidase 372 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1809 Prci-Chr3 32467691 32472743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1809 330 469 Calmodulin-binding Proteins AT2G22960 31.206 1.10e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1809 K16297 - gmx:100807680 833.943