Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1801 ATGTTTCCTTATTCACGTAATTCACTGATCAAATGGCGTTTCTTTCACAAGCCCATGTCCCCTTTGCTTCTTCTGGAATTCTACTTTCTCTCATGGGTCCTCCTCGCCTCTTGGAGCGACGCCTTTCCGGCCGATTCGGACAAATCAGTGCTTCTTCATTTCAAGAATTTGGTCTCTGATCCATCGGGGTTGCTTTCGAACTGGAATTCGGCCGGAGATTCCAATCACTGTTCTTGGTTCGGTGTCCTCTGCGACTCGAATTCGCGGGTTGTCGCCCTCAACATTACTGGAAATGGTGGTCGAAGTAATCGAAGCTCTTCTCCATGTACTGATTCTGCTGAATTTCCACTTTATGGATTTGGAATTAGGAGGAGCTGTGACGGCAGTGGAGGAGCATTGTCTGGGAAGATTTCGCCTCTGATTAGTAAGCTTACTGAGCTCAGGATTCTATCACTCCCGTTTAACGGTTTTGAGGGTGAAATTCCTTCTGAAATTTGGGGTATGAGCAAGTTGGAAGTTCTCGACCTAGAGGGCAACTCCATAACTGGGTCACTTCCGTCTCATTTTGGTGGCTTGAGGAGCTTGCGAGTTCTTAACCTCGGGTTTAATAAAATTGTCGGGGAGATACCGAACTCACTTGCACGTCTTGAAAGTTTGGAAATCCTGAATTTAGCTGCGAATGGCTTGAATGGATCTGTTCCTGGGTTCATCGGTAAGCTTAAGGGGGTTTATCTACTGTCTAATCTGCTTAGTGGGCCTATACCGCTTGAGATCGGGGATAACTGTGGGAAGCTTGAACATCTGGATTTGTCAGGTAACTTCTTAGTTCAGCGAATTCCAAGCAGTTTGGGAAATTGTAGTCAATTACGGACACTGTTGTTGTATTCGAATTTATTGGAAGAAGTAATTCCTTCCAAACTTGGTAAACTTAAGCTGCTTGAAGTGTTGGATGTTTCAAGAAATGCTCTCAGTGGTCCTGTACCTCCAGAAATTGGGAATTGTTCGGAGCTGTCTGTCCTCGTGCTATCAAATCTTTTCAATCCACTTCCTGAGGTTAACAATACTGTGCGGCAATCTTCGCAATTGGTCTCTATAAATGATGAATTGAATTATTTTGAAGGTGCCATGCCTGTGGAAATTACATCCCTCCCAAAGCTTAGAATATTGTGGGCACCGAGGGCAACTCTGGAAGGCAGTTTCCCAAGCAGTTGGGGTGCTTGTGATAACTTAGAGATGGTCAATTTGGCTCAGAATTACTTCACTGGGGAGTTTCCTAATCAGCTTAGTGGCTGCAAGAAGCTGCATTTTCTTGATTTAAGCTCAAACAACCTTACTGGAGAGCTTGCTGAAGAGCTTCATGTTCCTTGTATGGCTGTGTTTGATGTCAGTGGGAATATCTTGTCTGGTTCAATTCCTGAATTTTTTAATGGTACTTGTCCTTCAGTTCCTTCCTGGAATGGCAATCTGTTTGAACTTGACAATGTCTCAATTCCATATATGTCCTTTTTTTCGTCAAAGGTTCATGATGGATCCGTTTTGAGTTCAGTGGGAGATGTTGGTCTTTCCGTTTTGCATAACTTTGGGAACAACAACTTTTCTGGCATGCAGTCATTGCCCCTAGCACGTGACAGATTGGGGAAGAAAATGGTTTATGCGTTTCTTGTTGGAGAAAACAAGCTTGCAGGGCCAGTTCCTACCAACATATTTGATAAATGTGATGGATTAGATGCATTGCTATTAAATGTCAGCTATAATAGGCTGTCTGGCCAGATTCCTGCAAACTTTGGCGGGATGTGCAGGTCATTAAAATTTTTGGATGCATCCGGAAATCGGATAACTGGACCAATTCCTGTTGGTTTAGGAGAATTGGTATCTCTTGTTTCTCTGAACCTTAGTTGGAATCAGTTACAAGGTTTGATTCCTGTCAGCGTTGGCCAATTGAAAAATCTGGTGTTTCTTTCCTTGGCCTCTAATAACTTAACTGGCTCCATTCCTACCAACCTGGGGCAGTTGTACTCTTTAGAAGTCTTGGATCTGTCATCTAATTCTTTCACGGGTGAGATTCCAAAGTGTTTTGAGAACTTGAGAAATCTGACTAGTCTTCTTCTCAACAACAACAAACTCTCTGGGCATATTCCTACTGGTCTGGCAAATGTCACTACTCTCTCAACATTTAATGTGTCCTTCAATAACTTCTCTGGATCATTGCCATCAAATAATAACTCTCTGAAATGCAGCAGTGCCGTTGGGAATCCATATTTACGTCCTTGCTACATGCTTTCTCTGACTGCGCCATCAACAGATCAACAAGGACAGGTAGCTGATTCTAGTTCTTATACTGCTGCACCACCAGAAACTACCAGCAAAGGTAGTGGGTCTGGATTCAATTCTATTGAAATAGCATCTATAACATCTGCATCAGCCATCGTTTCTGTTCTTATAGCCTTGATTATTCTTTTCTTTTATACCCGCAAGTGGAACTCCAGGTCCAGGGTTGTTGGTTCCACAAGAAAAGAAGTTATCGTTTTTATTGATATTGGGGTTCCATTGACTTTTGAAACTGTCGTTCGTGCCACTGGTAACTTCAATGCAAGCAATTGTATTGGAAATGGAGGATTTGGAGCAACCTATAAGGCAGAGATAGCACCAGGAAATCTAGTGGCAATAAAACGTCTGTCAGTAGGACGATTCCAAGGTGTGCAACAATTTGATGCAGAGATTAAGACCCTTGGAAGACTTCGCCATCCAAATCTTGTCACTTTGTTTGGGTACCATGCCAGTGAGACTGAGATGTTTCTAATATACAATTATTTGCCGGGTGGGAACCTGGAAAAATTTATTCAGGAGAGGTCGACAAGGGCTGTGGACTGGAGAATTCTTCACAAGATTGCATTGGACATTGCCCGAGCGCTAGCCTACCTCCATGATCAGTGTGTGCCCCGTGTTCTCCATCGTGACGTGAAGCCCAGCAACATATTGTTGGATGAGGATTTCAATGCATATTTGTCTGACTTTGGATTGGCGAGACTTCTGGGAACTTCTGAGACCCATGCTACCACGGGGGTGGCAGGAACGTTTGGTTATGTTGCACCGGAGTATGCCATGACTTGTCGGGTTTCTGATAAGGCTGACGTGTATAGTTATGGTGTTGTACTTCTGGAGTTGCTCTCGGACAAGAAGGCATTAGATCCTTCATTTTCATCCTATGGGAATGGCTTTAACATAGTGGCATGGGCGTGCCTGCTACTTCGGCAAGGGAGTGCCAAGGAGTTCTTCACTGCTGGGTTATGGGATGTAGGACCCTCAGATGATTTGATAGAGGTGCTGCATTTGGCCATCATGTGTACCGTTGATTCCCTCTCGACGAGACCGTCCATGAAACAGGTTGTGCGTAGGCTAAAGCAACTTCAACCGCCATCATGCTAG 3426 0.4402 MFPYSRNSLIKWRFFHKPMSPLLLLEFYFLSWVLLASWSDAFPADSDKSVLLHFKNLVSDPSGLLSNWNSAGDSNHCSWFGVLCDSNSRVVALNITGNGGRSNRSSSPCTDSAEFPLYGFGIRRSCDGSGGALSGKISPLISKLTELRILSLPFNGFEGEIPSEIWGMSKLEVLDLEGNSITGSLPSHFGGLRSLRVLNLGFNKIVGEIPNSLARLESLEILNLAANGLNGSVPGFIGKLKGVYLLSNLLSGPIPLEIGDNCGKLEHLDLSGNFLVQRIPSSLGNCSQLRTLLLYSNLLEEVIPSKLGKLKLLEVLDVSRNALSGPVPPEIGNCSELSVLVLSNLFNPLPEVNNTVRQSSQLVSINDELNYFEGAMPVEITSLPKLRILWAPRATLEGSFPSSWGACDNLEMVNLAQNYFTGEFPNQLSGCKKLHFLDLSSNNLTGELAEELHVPCMAVFDVSGNILSGSIPEFFNGTCPSVPSWNGNLFELDNVSIPYMSFFSSKVHDGSVLSSVGDVGLSVLHNFGNNNFSGMQSLPLARDRLGKKMVYAFLVGENKLAGPVPTNIFDKCDGLDALLLNVSYNRLSGQIPANFGGMCRSLKFLDASGNRITGPIPVGLGELVSLVSLNLSWNQLQGLIPVSVGQLKNLVFLSLASNNLTGSIPTNLGQLYSLEVLDLSSNSFTGEIPKCFENLRNLTSLLLNNNKLSGHIPTGLANVTTLSTFNVSFNNFSGSLPSNNNSLKCSSAVGNPYLRPCYMLSLTAPSTDQQGQVADSSSYTAAPPETTSKGSGSGFNSIEIASITSASAIVSVLIALIILFFYTRKWNSRSRVVGSTRKEVIVFIDIGVPLTFETVVRATGNFNASNCIGNGGFGATYKAEIAPGNLVAIKRLSVGRFQGVQQFDAEIKTLGRLRHPNLVTLFGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDEDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACLLLRQGSAKEFFTAGLWDVGPSDDLIEVLHLAIMCTVDSLSTRPSMKQVVRRLKQLQPPSC 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1801 1141 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 255 348 - -
Prci3g1801 1141 Pfam Leucine Rich Repeat 264 286 IPR001611 GO:0005515
Prci3g1801 1141 ProSiteProfiles Protein kinase domain profile. 862 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1801 1141 CDD STKc_IRAK 868 1136 - -
Prci3g1801 1141 FunFam Leucine-rich repeat receptor protein kinase EMS1 569 665 - -
Prci3g1801 1141 Gene3D Ribonuclease Inhibitor 242 350 IPR032675 -
Prci3g1801 1141 SMART LRR_typ_2 671 694 IPR003591 -
Prci3g1801 1141 SMART LRR_typ_2 168 191 IPR003591 -
Prci3g1801 1141 SMART LRR_typ_2 695 718 IPR003591 -
Prci3g1801 1141 SMART LRR_typ_2 310 334 IPR003591 -
Prci3g1801 1141 SMART LRR_typ_2 192 216 IPR003591 -
Prci3g1801 1141 SMART LRR_typ_2 623 646 IPR003591 -
Prci3g1801 1141 SMART LRR_typ_2 647 670 IPR003591 -
Prci3g1801 1141 SMART LRR_typ_2 262 286 IPR003591 -
Prci3g1801 1141 SUPERFAMILY L domain-like 45 345 - -
Prci3g1801 1141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 982 994 IPR008271 GO:0004672|GO:0006468
Prci3g1801 1141 SMART serkin_6 862 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1801 1141 Gene3D Phosphorylase Kinase; domain 1 824 937 - -
Prci3g1801 1141 Pfam Leucine rich repeat N-terminal domain 44 85 IPR013210 -
Prci3g1801 1141 ProSitePatterns Protein kinases ATP-binding region signature. 868 890 IPR017441 GO:0005524
Prci3g1801 1141 SUPERFAMILY L domain-like 302 499 - -
Prci3g1801 1141 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 661 744 - -
Prci3g1801 1141 SUPERFAMILY Protein kinase-like (PK-like) 845 1133 IPR011009 -
Prci3g1801 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 361 538 - -
Prci3g1801 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 938 1140 - -
Prci3g1801 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 826 937 - -
Prci3g1801 1141 Gene3D Ribonuclease Inhibitor 526 769 IPR032675 -
Prci3g1801 1141 Gene3D Ribonuclease Inhibitor 351 489 IPR032675 -
Prci3g1801 1141 SUPERFAMILY L domain-like 557 784 - -
Prci3g1801 1141 Gene3D Transferase(Phosphotransferase) domain 1 938 1138 - -
Prci3g1801 1141 Pfam Protein kinase domain 865 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1801 1141 MobiDBLite consensus disorder prediction 768 792 - -
Prci3g1801 1141 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Prci3g1801 1141 Pfam Leucine rich repeat 649 708 IPR001611 GO:0005515
Prci3g1801 1141 Gene3D Ribonuclease Inhibitor 43 241 IPR032675 -
Prci3g1801 1141 FunFam Leucine-rich repeat receptor protein kinase EMS1 666 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1801 Prci-Chr3 32420338 32424500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1801 44 1141 Receptor kinase-like Gene Family AT3G02130 66.816 0.0 1415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Prci3g1801 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1801 - - gmx:100803891 1692.17