Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1775 ATGATGATGGGTTCAGAGAAAGCGTGGAAGAAAGGGCCTTGGACTATTGAAGAGGATAAGCTGCTTACTGAATACGTGAACTTGCATGGTGAAGGAAGGTGGAGTTCAGTGGCCAAGTTTACAGGGTTGAATAGGAGTGGGAAAAGTTGCAGGTTGAGATGGGTCAACTATTTGAAGCCTGGGCTGAAGAAAGGCCACTTGACACCTCAAGAAGAAGCCATCATCTTTGAAATCCATGCTGTACTGGGCAACAAGTGGTCTACCATAGCAAAATATTTGCCGGGTAGAACAGACAATGAGATTAAGAACTACTGGAGAACCCACTTCAAGAAGAAAGACAAATCCTCCCGTATTAATAAGAAGCATGAAAAGAGAAGATCAAGGATTCAAAAACAGATGAAACAACAAGAGCAGCAGCAGAAACAACAACCTCAACAGTATGATCTGCAAAGCAGGACCTCGTCTCATGCGGACTCAAACAATCAAACAAACTTTTCTGGGACAGTTCTACAAGACAACTACCACCTAGTTACCACCACGATGGAAGAGCAAATTAATTACTTTCCTTTCGTGTATCAGGATTACTTTCCATCCCCGTGGCCTCAAAGTACGGGAGAAGAAGATGAAGACTTGTGGGTTACGTTATGGAACCTTGACGAAGAAACACAAGGTCATGGAGATCATGTAAACCAGTTCAACAAAGTTTCCATTCCAAACCAAGTTACAACTTCTTCTTTCGATGATATTACCAACGACCTCTGCTTTGCGAAATACGTGTCCGGCTGA 786 0.43 MMMGSEKAWKKGPWTIEEDKLLTEYVNLHGEGRWSSVAKFTGLNRSGKSCRLRWVNYLKPGLKKGHLTPQEEAIIFEIHAVLGNKWSTIAKYLPGRTDNEIKNYWRTHFKKKDKSSRINKKHEKRRSRIQKQMKQQEQQQKQQPQQYDLQSRTSSHADSNNQTNFSGTVLQDNYHLVTTTMEEQINYFPFVYQDYFPSPWPQSTGEEDEDLWVTLWNLDEETQGHGDHVNQFNKVSIPNQVTTSSFDDITNDLCFAKYVSG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1775 261 Gene3D - 9 64 - -
Prci3g1775 261 MobiDBLite consensus disorder prediction 110 166 - -
Prci3g1775 261 MobiDBLite consensus disorder prediction 133 166 - -
Prci3g1775 261 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Prci3g1775 261 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Prci3g1775 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Prci3g1775 261 MobiDBLite consensus disorder prediction 110 129 - -
Prci3g1775 261 CDD SANT 68 109 IPR001005 -
Prci3g1775 261 Coils Coil 119 139 - -
Prci3g1775 261 SMART sant 10 60 IPR001005 -
Prci3g1775 261 SMART sant 63 111 IPR001005 -
Prci3g1775 261 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Prci3g1775 261 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 6 171 IPR044676 GO:0003700|GO:0006355|GO:0043565
Prci3g1775 261 Pfam Myb-like DNA-binding domain 67 108 IPR001005 -
Prci3g1775 261 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Prci3g1775 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 113 IPR017930 -
Prci3g1775 261 Gene3D - 67 112 - -
Prci3g1775 261 FunFam Myb transcription factor 11 63 - -
Prci3g1775 261 CDD SANT 13 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1775 Prci-Chr3 32175649 32177176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1775 10 221 MYB Transcription Factor Family AT3G30210 51.598 2.82e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci3g1775 Myb_DNA-binding 3.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1775 K09422 - gmx:100785540 260.381