Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1767 ATGGGTTCTGTTTGTTGTTGCTTGAGTGCTGATGAATTTGAAGATTATGTAAATAGAAATAGTTCTGTGTATAGGAATTGTGTGTGTCTCAATTGCTTCCTACAGAACTTTATGAATGCGTATTCAGCAATATTCCACAGAGGCGACGTCCATTCACTACCTTCATCCATACAGGGGGCAGCATCTATGGCTTCGGCAGCATCACTTGATAATTCACTATCTGACATGTACCATTCTCCTCCAAGGCCCTTGCCTTATGATGTAGACCCTAGGCATTTCCGCTCACGTGATTTATTTGTTTCAAGGCATGACAAAGGTTCTAGTCATTTGAATGAAGAGTCAGAACCTCTAAGAGGTGACGTAGACGGGGATCAAGAATCCTTAAATTCTGGAGGCAAATGGAATGGATCTTCCTGTGAAGATGCATCAAAGGAATACAGATCTAAGTCCTCAGTAAGGTTCTCATCAGCAAAATATGCAACTGGAGCTGGGCTTGTTTATGCATCATCCGAAGAGGAGGATGTTTGCCCAACTTGTCTTGAAGAGTATACTGAAGAGAACCCAAGGATATTGACAAAGTGCAGTCATCATTTTCATCTTAGTTGCATTTACGAGTGGATGGAGAGAAGTGAAAGCTGTCCAGTCTGTGGGAAGGTGATGGTATTCGATGAAACAACTTAA 681 0.4185 MGSVCCCLSADEFEDYVNRNSSVYRNCVCLNCFLQNFMNAYSAIFHRGDVHSLPSSIQGAASMASAASLDNSLSDMYHSPPRPLPYDVDPRHFRSRDLFVSRHDKGSSHLNEESEPLRGDVDGDQESLNSGGKWNGSSCEDASKEYRSKSSVRFSSAKYATGAGLVYASSEEEDVCPTCLEEYTEENPRILTKCSHHFHLSCIYEWMERSESCPVCGKVMVFDETT 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1767 226 FunFam E3 ubiquitin-protein ligase At3g02290-like 153 223 - -
Prci3g1767 226 MobiDBLite consensus disorder prediction 104 122 - -
Prci3g1767 226 MobiDBLite consensus disorder prediction 104 138 - -
Prci3g1767 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 223 IPR013083 -
Prci3g1767 226 SUPERFAMILY RING/U-box 171 223 - -
Prci3g1767 226 SMART ring_2 176 216 IPR001841 -
Prci3g1767 226 Pfam RING-H2 zinc finger domain 171 216 IPR024766 GO:0008270
Prci3g1767 226 CDD RING-H2_AIRP1-like 172 220 - -
Prci3g1767 226 ProSiteProfiles Zinc finger RING-type profile. 176 216 IPR001841 -
Prci3g1767 226 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 60 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1767 Prci-Chr3 32096033 32100560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1767 1 224 C3H Transcription Factor Family AT5G38895 60.000 3.27e-98 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1767 - - gmx:100788192 370.548