Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1766 ATGGGTTCTGTTTGTTGTTGCTTGAGTGCTGATGAATTTGAAGATTATGTAAATAGAAATAGTTCTGTGTATAGGAATTGTGTGTGTCTCAATTGCTTCCTACAGAACTTTATGAATGCGTATTCAGCAATATTCCACAGAGGCGACGTCCATTCACTACCTTCATCCATACAGGGGGCAGCATCTATGGCTTCGGCAGCATCACTTGATAATTCACTATCTGACATGCATGACAAAGGTTCTAGTCATTTGAATGAAGAGTCAGAACCTCTAAGAGGTGACGTAGACGGGGATCAAGAATCCTTAAATTCTGGAGGCAAATGGAATGGATCTTCCTGTGAAGATGCATCAAAGGAATACAGATCTAAGTCCTCAGTAAGGTTCTCATCAGCAAAATATGCAACTGGAGCTGGGCTTGTTTATGCATCATCCGAAGAGGAGGATGTTTGCCCAACTTGTCTTGAAGAGTATACTGAAGAGAACCCAAGGATATTGACAAAGTGCAGTCATCATTTTCATCTTAGTTGCATTTACGAGTGGATGGAGAGAAGTGAAAGCTGTCCAGTCTGTGGGAAGGTGATGGTATTCGATGAAACAACTTAA 603 0.4129 MGSVCCCLSADEFEDYVNRNSSVYRNCVCLNCFLQNFMNAYSAIFHRGDVHSLPSSIQGAASMASAASLDNSLSDMHDKGSSHLNEESEPLRGDVDGDQESLNSGGKWNGSSCEDASKEYRSKSSVRFSSAKYATGAGLVYASSEEEDVCPTCLEEYTEENPRILTKCSHHFHLSCIYEWMERSESCPVCGKVMVFDETT 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1766 200 MobiDBLite consensus disorder prediction 74 114 - -
Prci3g1766 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 197 IPR013083 -
Prci3g1766 200 CDD RING-H2_AIRP1-like 146 194 - -
Prci3g1766 200 ProSiteProfiles Zinc finger RING-type profile. 150 190 IPR001841 -
Prci3g1766 200 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 60 198 - -
Prci3g1766 200 FunFam E3 ubiquitin-protein ligase At3g02290-like 127 197 - -
Prci3g1766 200 Pfam RING-H2 zinc finger domain 145 190 IPR024766 GO:0008270
Prci3g1766 200 SUPERFAMILY RING/U-box 145 197 - -
Prci3g1766 200 SMART ring_2 150 190 IPR001841 -
Prci3g1766 200 MobiDBLite consensus disorder prediction 76 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1766 Prci-Chr3 32096030 32100560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1766 1 198 C3H Transcription Factor Family AT5G38895 54.378 3.24e-83 248