Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1760 ATGGGTTCTGTTTGTTGTTGCTTGAGAGCTGATCAATTTGAAGATTATGTAAATCGAAATGGTTCTGTATATAGGAATTGTGTGTGTCTCAATTGCTTCCTACAGAACTTTTTGAATGCGTATTCAGCAATATTCCGCAGAGGCGAAGTGCATTCACTACCTTCATCCATACAGGGGGCAGCATCTATGACTTCTGCAGCATCACTCGATAATTCACTATCTGACATGTACCATTCTCCACCAAGGCCCTTGCCTTATGATGTAGACCCCAGGCATTTCCGCTCACGTCATTTATTTGTTTCAAGGCATGACAAAGGTTCTAGTCATTTGAATGAAGAGTCAGAACCTCTAAGAGGTGCTGTGGATGGGGATCAAGAATCCTTAAATTCTGGAGGCAAATGGAACGGATCTACCTGTGAAGATGCATCACAGGAATACAGATCTAAGTCCTCAGTAAGGTTCTCATCAGCAAAATATGCAACTGGTGCTGGGCTTGTTTATGCATCATTTGAAGATGAGGATCTTTGCCCAACTTGTCTTGAAGAATATACTGAAGAGAACCCAAGGATATTGACAAAGTGCAATCATCATTTTCATCTTAGTTGCATTTACGAGTGGATGGAGAGAAGTGAAAACTGTCCAGTTTGTGGGAAGGTGATGGTATTCGATGAAACAACTTAA 681 0.4126 MGSVCCCLRADQFEDYVNRNGSVYRNCVCLNCFLQNFLNAYSAIFRRGEVHSLPSSIQGAASMTSAASLDNSLSDMYHSPPRPLPYDVDPRHFRSRHLFVSRHDKGSSHLNEESEPLRGAVDGDQESLNSGGKWNGSTCEDASQEYRSKSSVRFSSAKYATGAGLVYASFEDEDLCPTCLEEYTEENPRILTKCNHHFHLSCIYEWMERSENCPVCGKVMVFDETT 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1760 226 Pfam RING-H2 zinc finger domain 173 216 IPR024766 GO:0008270
Prci3g1760 226 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 60 224 - -
Prci3g1760 226 CDD RING-H2_AIRP1-like 172 220 - -
Prci3g1760 226 MobiDBLite consensus disorder prediction 104 120 - -
Prci3g1760 226 SMART ring_2 176 216 IPR001841 -
Prci3g1760 226 MobiDBLite consensus disorder prediction 104 140 - -
Prci3g1760 226 SUPERFAMILY RING/U-box 171 223 - -
Prci3g1760 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 223 IPR013083 -
Prci3g1760 226 ProSiteProfiles Zinc finger RING-type profile. 176 216 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1760 Prci-Chr3 32071446 32076603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1760 1 224 C3H Transcription Factor Family AT5G38895 58.222 3.67e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1760 - - gmx:100788192 379.793