Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1751 ATGGCTCGTCAAACTACTTTAGTTATCATTGGTGTCACAGTTGGTGTGGCCTTTGGAATTTTTATTGCTTCCCTTGTATTTTTTGGGATAAGGTGGTATAAGAAGCATGCTCGTCTTACACATTCTGCAAAAGAGAGTAGTTTAACCACTCTTCCAATACGCACAAATGGATTAGGAACAAGCACTGACTTTAGTGCATCTCTTACAAGTTCCATATCCAATTCGATGTCAGAAAATCTGCAAAGAACCTCCAATTTCTCTTGGTGGAGTCATCAAAACAAAGATCGATTTTCTCCGACATCTAGCATTTCAAAAGAAATCCAAAAGGCCACACAGAATTTCACCACTATTTTGGGACAAGGATCATTTGGCACAGTTTATAAAGCTACAATGCCTACCGGAGAGGTGGTGGCTGTAAAGGTGCTTGACTCTAATTCTAAACAAGGGGAGAAAGAATTCCAAACAGAGGTGCTTTTGCTGGGAAGGTTGCATCATCGGAATCTTGTGAATTTAGTAGGATATTGTGCAGATAAAGGACAGCGTATTCTGGTTTATGAGTTCATGAGCAATGGAAGTTTGTCAAACCTTTTATACAGTGAAGAAAAGGCTTTGAGTTGGAATGAAAGGCTTCAAATTGTTATTGATATTTCACACGGAATTGAATATCTTCATGAAGGAGCAGTCCCACCTGTTATACATCGTGATTTGAAGTCTGCCAATATATTGTTAGATCATTCAATGAGAGCTAAGGTTGCTGATTTTGGGCTGTCAAAGGAAGTGATCTTTGATGGCCGGAATTCAGGCCTTAAAGGTACATACGGCTACATGGACCCAGCATACATTTCCACAAACAAGTTCACAATGAAGAGTGACATCTACAGTTTTGGTATAATCATTTTTGAGCTCATTACAGCCATCCACCCGCATCAAAATTTGATGGAATATATTAACCTTGCTGCTATGGATCATGATGGCGTGGATGAGATACTTGACAAACAACTTGTAGGAAAATGCAACCCTGAAGAAGTAAGGCAGCTTGCTAAAATTTCATATAAATGTTTGCACAAATCTCCTAGGAAACGCCCCTCCATTGGTGAGGTTTCACAGGGCATATTGAGAATAAAAGAAAGGCACCTTGTGAAAGAAGATACCTTGTCATTTGCAGGCAGTAACTTTTCCAGAGCTTTGAGTCGAATAGAGGATCAACAAGTTGAATTAAATAGGTTAGCTACCATGAACCACAGAGAAACTGGGTGA 1257 0.3954 MARQTTLVIIGVTVGVAFGIFIASLVFFGIRWYKKHARLTHSAKESSLTTLPIRTNGLGTSTDFSASLTSSISNSMSENLQRTSNFSWWSHQNKDRFSPTSSISKEIQKATQNFTTILGQGSFGTVYKATMPTGEVVAVKVLDSNSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCADKGQRILVYEFMSNGSLSNLLYSEEKALSWNERLQIVIDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEVIFDGRNSGLKGTYGYMDPAYISTNKFTMKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMDHDGVDEILDKQLVGKCNPEEVRQLAKISYKCLHKSPRKRPSIGEVSQGILRIKERHLVKEDTLSFAGSNFSRALSRIEDQQVELNRLATMNHRETG 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1751 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Prci3g1751 418 Gene3D Phosphorylase Kinase; domain 1 70 187 - -
Prci3g1751 418 Pfam Protein tyrosine and serine/threonine kinase 114 368 IPR001245 GO:0004672|GO:0006468
Prci3g1751 418 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Prci3g1751 418 Gene3D Transferase(Phosphotransferase) domain 1 188 390 - -
Prci3g1751 418 ProSiteProfiles Protein kinase domain profile. 112 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1751 418 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 188 395 - -
Prci3g1751 418 SUPERFAMILY Protein kinase-like (PK-like) 84 368 IPR011009 -
Prci3g1751 418 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 377 - -
Prci3g1751 418 FunFam serine/threonine-protein kinase PBS1-like 78 187 - -
Prci3g1751 418 CDD STKc_IRAK 118 374 - -
Prci3g1751 418 SMART serkin_6 112 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1751 Prci-Chr3 31983145 31995954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1751 2 367 Receptor kinase-like Gene Family AT4G39110 39.005 1.46e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Prci3g1751 PK_Tyr_Ser-Thr 7.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1751 - - gmx:100819995 678.322