Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1736 ATGGCTAATAACTCTCAACTTCCATCCCTCTTTTCCATCGAAGATGAATGTGAAGAATCAGGCCCCGATGAACAGGTATCTGATCTCCCATCACCGACTGCTCACGATCATTGGTGCACCAACCCCTCGAACCCCTTTGCAACTGTGTCCTTCGACCATTTGAGCTACAATTCAAACTGGTACTCTGATTCGGACTCCGATTCGGTTAGTTGCTTTGTTACAGATCTTTTTGAAAATCGCTTGGCGGAGGACTCTCACCGTCGTTGCAACGATAATTCTGATATTAATCCGTTTTCGGCCGTTCCTTGCGATGGTCACGGTGGAGAAGGGTCAGATTTTACGGAGACGGAATTAGGGTCTGGATTTGGAACGGGAAAGAATGCTGGGATTTCTGCAGTACGTGAGGCATCTGGCTCTGAAAGGGTTCGCTCGCAAATGGATGGCCTTCGAATTGTCGGGTTTAGTTCTGATTCGGATTCAAATACTGATGAAGAGCTTGATAGGGCTATAGAACTGAGTTATGGTGAAAATGATGGCAACAGAGCTAGTGGCTTTGACGATTTTGATGTTCATTTTTGTTGGGACAGCATTTGCTTGGAGGATCAGAGGACCCTCAATGAACATCTTGAATGGGAGGATTTAGAGGAAAGAGTCAATGATGGAGAAGACTTGAGCGTGGTGATTGGTGAGGTTGATGATCAATCAGTAGCATCTGGATTTTCCTATGGAGAAGAGTCCGGTGAAGAGGCATTGAGATACCTTGAATGGGAAATTCTGTTAGCAGTCAACAATGTGGAGAGGAATTCGAGCTTGGAGCATGGCGCCACTGGAGGTCCCTTCGTAACGGTTCAGGATGATGGTTATATGAACACAGCTGAATATGATATATTTTTTGGGCAATTTCTGGAAAATGAGAGTTCCTTAAAGGGTGGTCCTCCTACCGCTAAAAGTGTTATGGAGAATCTTCCTTTAGTAGAATTGACAAAGGAAGACTTGGATGGGGAGAATGTAGCTTGTGCTGTTTGCAAAGATGAAATCCTACGAAAGGAAAAAGTGAGAAGGCTTCCTTGCTCACACTTTTACCATGGAGACTGTATTATGCCATGGTTGAGCATTCGTAATACGTGCCCTGTTTGTCGGTTTGAACTGCCCACAGATGATCCCGATTATGAGCAGAGGAAGGGTCAGAGAACTGCTCTTGATCTGTTGGAGTTTTCAGTGTAG 1224 0.4502 MANNSQLPSLFSIEDECEESGPDEQVSDLPSPTAHDHWCTNPSNPFATVSFDHLSYNSNWYSDSDSDSVSCFVTDLFENRLAEDSHRRCNDNSDINPFSAVPCDGHGGEGSDFTETELGSGFGTGKNAGISAVREASGSERVRSQMDGLRIVGFSSDSDSNTDEELDRAIELSYGENDGNRASGFDDFDVHFCWDSICLEDQRTLNEHLEWEDLEERVNDGEDLSVVIGEVDDQSVASGFSYGEESGEEALRYLEWEILLAVNNVERNSSLEHGATGGPFVTVQDDGYMNTAEYDIFFGQFLENESSLKGGPPTAKSVMENLPLVELTKEDLDGENVACAVCKDEILRKEKVRRLPCSHFYHGDCIMPWLSIRNTCPVCRFELPTDDPDYEQRKGQRTALDLLEFSV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1736 407 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 301 386 IPR013083 -
Prci3g1736 407 MobiDBLite consensus disorder prediction 1 36 - -
Prci3g1736 407 Pfam Ring finger domain 339 380 IPR001841 -
Prci3g1736 407 MobiDBLite consensus disorder prediction 107 127 - -
Prci3g1736 407 SMART ring_2 339 379 IPR001841 -
Prci3g1736 407 ProSiteProfiles Zinc finger RING-type profile. 339 380 IPR001841 -
Prci3g1736 407 SUPERFAMILY RING/U-box 319 386 - -
Prci3g1736 407 FunFam E3 ubiquitin-protein ligase RING1-like 300 386 - -
Prci3g1736 407 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 215 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1736 Prci-Chr3 31869075 31870829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1736 148 394 C3H Transcription Factor Family AT3G02340 38.403 4.89e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1736 - - pcin:129304768 816.224