Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1728 ATGACCTTAAGGAGTCTCCATTTTCCAGAGCTCGTGTCTGGTCTAGAACGTTCCAACTGTATGGAGAAACTAAGAGAAGCTGTTCTTTGTTTTGTGACACTACTATGGTTATGGGGTTCTGCGAATGCTGTTCTTTCTCCTAAAGGGGTGAATTTTGAAGTGCAAGCTTTAATGGGCATAAAAGCTTCTCTGCGGGATCCTCATGGCATCTTAGATAACTGGGATGCGGATGCAGTTGATCCTTGTAGCTGGACTATGGTCACCTGTTCGCTGGACAACTTGGTTATTGGCCTGGGTACTCCCAGTCAAAGTATATCTGGTACTCTGTCTCGAAGCATAGGTAACCTAACAAACCTTCAGATTGTGTTGCTACAGAATAATAACATAACAGGTCCAATACCTTCAGAGCTAGGCAGGCTTTCAAATCTTCATACACTTGATCTCTCTAATAACTTATTCAATGGGGAAGTTCCCCCTTCTCTCGGTCACTTGAGAAGCCTTCAATACCTGAGGCTCAACAATAACAGCCTTTCTGGAGAATGTCCAGAGTCACTAGCTAACATGACACAGCTTGCTTTTCTTGACTTGTCCTATAACAACCTCAGTGGTCCAATGCCCAGAATTTTGGCCAAATCATTCAACATTGTCGGAAACCCTCTCGTCTGTGATACGGGGAAAGAGACAAAATGCCATGGCATGACGACATTGATGCCTATGTCCATGAACTTAAACACTACAAGAGATGCTATACCATCAAGCAAAACAAAATCACACAAGATGGCCATCGCCTTTGGATTAAGTCTAGGATTCCTTTGCTTGATAGTTCTTGGTTTTGGCCTATTTCTATGGTGGAGGCACAAACATCACGAACAGGCATTTTTTGATGTCAAAGACCGATATCATGAAGAAGTGTACCTGGGAAACCTGAAGAGGTTCCAATTTAGAGAACTTCAGATAGCTACCCACAACTTCAGCAGCAAGAACATTCTGGGAAAGGGTGGCTTTGGAAATGTGTACAAAGGAATGCTCCCAGATGGAACTGTTGTGGCTGTCAAGAGGCTTAAAGATGGCAATGCCATAGGAGGAGATATCCAATTTCAGACTGAAGTTGAAATGATTAGCTTGGCAGTGCACCGAAACCTCCTTAGACTCTATGGATTCTGTGTGACACCAAATGAAAGGCTTCTGGTTTACCCTTACATGTCCAATGGCAGTGTTGCTTCCCGTCTCAAGGCTAAACCAGTGTTGGACTGGGGCACTAGGAAGCAAATCGCCTTGGGGACAGCCAGGGGACTGCTATATCTTCATGAGCAGTGTGATCCAAAGATAATTCATAGGGATGTGAAAGCCGCTAACATATTGCTCGATGACTATTGTGAGGCAGTGGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCACCAAGATTCACACGTTACAACTGCAGTGAGAGGCACTGTAGGGCATATAGCCCCTGAGTATCTCTCCACTGGGCAATCCTCTGAGAAAACTGATGTCTTCGGATTTGGCATTCTACTTCTTGAACTGATCACAGGCCAGAGGGCTCTAGAATTTGGCAAGATAGCAAACCAGAAAGGAGCCATGCTTGATTGGGTGAAGAAAATTCATCAGGAGAAGAAGTTAGAACTGTTCGTGGACAAGGATCTGAAGAATAACTATGACAGGATTGAGCTGGAAGAAATGGTTCAAGTGGCTCTCTTGTGTACTCAATACCTTCCTGGTCACAGGCCCAAAATGTCTGAAGTAGTAAGGATGCTTGAAGGAGATGGATTGGCAGAAAGATGGGAAGCTAATCAAAGAGCTGACATGAGCAAGTGCAAGGCTCCTGAATTCTCCTCATCTGATCGATATTCTGATCTCACTGATGACTCTTCGATGCAAGTCCAGGCCATGGAACTTTCAGGCCCGAGGTGA 1935 0.446 MTLRSLHFPELVSGLERSNCMEKLREAVLCFVTLLWLWGSANAVLSPKGVNFEVQALMGIKASLRDPHGILDNWDADAVDPCSWTMVTCSLDNLVIGLGTPSQSISGTLSRSIGNLTNLQIVLLQNNNITGPIPSELGRLSNLHTLDLSNNLFNGEVPPSLGHLRSLQYLRLNNNSLSGECPESLANMTQLAFLDLSYNNLSGPMPRILAKSFNIVGNPLVCDTGKETKCHGMTTLMPMSMNLNTTRDAIPSSKTKSHKMAIAFGLSLGFLCLIVLGFGLFLWWRHKHHEQAFFDVKDRYHEEVYLGNLKRFQFRELQIATHNFSSKNILGKGGFGNVYKGMLPDGTVVAVKRLKDGNAIGGDIQFQTEVEMISLAVHRNLLRLYGFCVTPNERLLVYPYMSNGSVASRLKAKPVLDWGTRKQIALGTARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKIANQKGAMLDWVKKIHQEKKLELFVDKDLKNNYDRIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEANQRADMSKCKAPEFSSSDRYSDLTDDSSMQVQAMELSGPR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1728 644 FunFam Somatic embryogenesis receptor-like kinase 1 401 613 - -
Prci3g1728 644 ProSiteProfiles Protein kinase domain profile. 324 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1728 644 Pfam Leucine rich repeat 141 201 IPR001611 GO:0005515
Prci3g1728 644 FunFam Putative LRR receptor-like serine/threonine-protein kinase 50 232 - -
Prci3g1728 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Prci3g1728 644 SUPERFAMILY Protein kinase-like (PK-like) 300 594 IPR011009 -
Prci3g1728 644 MobiDBLite consensus disorder prediction 606 644 - -
Prci3g1728 644 Gene3D Phosphorylase Kinase; domain 1 293 400 - -
Prci3g1728 644 SUPERFAMILY L domain-like 53 215 - -
Prci3g1728 644 FunFam Somatic embryogenesis receptor kinase 1 293 400 - -
Prci3g1728 644 Pfam Leucine rich repeat N-terminal domain 53 90 IPR013210 -
Prci3g1728 644 MobiDBLite consensus disorder prediction 621 638 - -
Prci3g1728 644 Gene3D Ribonuclease Inhibitor 50 232 IPR032675 -
Prci3g1728 644 Gene3D Transferase(Phosphotransferase) domain 1 401 613 - -
Prci3g1728 644 SMART LRR_typ_2 188 211 IPR003591 -
Prci3g1728 644 SMART LRR_typ_2 164 187 IPR003591 -
Prci3g1728 644 SMART LRR_typ_2 116 140 IPR003591 -
Prci3g1728 644 Pfam Protein kinase domain 325 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1728 644 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Prci3g1728 644 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 31 604 - -
Prci3g1728 644 SMART serkin_6 324 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1728 Prci-Chr3 31769567 31772979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1728 21 644 Receptor kinase-like Gene Family AT5G16000 77.057 0.0 988
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci3g1728 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1728 - - gmx:100798412 1082.4