Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1723 ATGGAGGAGGATGCGATTCAAGCACAAGCGTGTAAATTCCCTAGAGTCGGAAATGGCAGAAACGACTCCAGCAAGATAGGTTCTAGAGGGATCGAGCATTGCCCAGACGGCGAAGACAATGGAGGGCTGACAAGAAGAGGCGGATTTAGCGATGTCAGCTCGAACCGCTTCCATAGCTGGCACCAACATTCTTCAAGAATCATTAGGGTTTCTCGAGCATCTGGAGGGAAAGACCGGCACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACCGAAGGGTTAGGCTCTCGGTAACCACAGCAATCCAGTTCTATGATCTTCAAGATCGGCTTGGCTACGACCAACCCAGTAAAGCAGTGGAGTGGCTAATCAAAGCAGCCGCTGGTGCCATTTCTGAGCTCCCGTCTCTGAACACCACATTCCCTGATACCCCAAAGCAGCCCAGCGATGAGAAAAGGTTTGATACAGCTGATGCTGAGGAAGATGGTGAGGGTGATTATCATCACACTCAAAGTCAGAACCTTTCTTTGTCTAAGTCTGCCTGTAGCAGCACTTCCGAGACAAGCAAAGGTTCTGGCTTGTCCCTCTCAAGGTCTGAGATTCGAGTAAACCGAGTGAAGGCCCGAGAGAGGGCAAGAGAGAGAGCGGCAAAAGAGAAGGAGAAAGAGAACACTGCCCATCCCCACAATGTGAATAACTCCATTTCTCAAACTGCTTCTTTCACTGAGCTTCTCACCACGGGGATCAGTAGTACTGTTCCTTCCACTACTAGTCCCAACGGTGATGACCACGAGCCTAATTTGTTCAACAAGGCAGCGAGACAGCAATGGTGTACAGCACCCACGGACTACTTTAGCTCAGGCCTTGCGGGGAATCCCTCTATGAGAACGCATAATCAATCTTCAGGGTTCTCAGGGCAATTCCAATTGGGAAACTCTTCACTCCCACTTCAGGCACTGTCTGTTTCGCCTTTCAACGTGGGGAGTGAAAATCACCCGGATCAGCTGCAGCATTTCTCATTCATTCCTGACCATCTCATACCCAGCGGAAGCAGCGATTACAACCTTAACTTCACCATCTCTTCTTCTCCAGGCCTTGCTGGTTTCAACAGGGGGACCCTTCAGTCCAATTCACCATCTGTTTTGCCTCACCCTCTTCAGAGGTTTTCTTCTTCTCCTTTAGACGGATCCAGTCTACCTTTCTTCATAGGAGCTGCCGCTGCTGCGCCAACAATGGAGAATCACCAGCATATGTTCTCGCCTGGATTTGATGGCCGCTTGCAACTATGCTATGGCGATTTAACCCGCCATTCTGACCACAAGGGCAAAGGCAAGAACTGA 1341 0.4989 MEEDAIQAQACKFPRVGNGRNDSSKIGSRGIEHCPDGEDNGGLTRRGGFSDVSSNRFHSWHQHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAAGAISELPSLNTTFPDTPKQPSDEKRFDTADAEEDGEGDYHHTQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERAAKEKEKENTAHPHNVNNSISQTASFTELLTTGISSTVPSTTSPNGDDHEPNLFNKAARQQWCTAPTDYFSSGLAGNPSMRTHNQSSGFSGQFQLGNSSLPLQALSVSPFNVGSENHPDQLQHFSFIPDHLIPSGSSDYNLNFTISSSPGLAGFNRGTLQSNSPSVLPHPLQRFSSSPLDGSSLPFFIGAAAAAPTMENHQHMFSPGFDGRLQLCYGDLTRHSDHKGKGKN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1723 446 MobiDBLite consensus disorder prediction 202 227 - -
Prci3g1723 446 Pfam TCP family transcription factor 75 222 IPR017887 -
Prci3g1723 446 MobiDBLite consensus disorder prediction 146 168 - -
Prci3g1723 446 MobiDBLite consensus disorder prediction 19 47 - -
Prci3g1723 446 ProSiteProfiles TCP domain profile. 76 134 IPR017887 -
Prci3g1723 446 MobiDBLite consensus disorder prediction 169 199 - -
Prci3g1723 446 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 52 368 IPR005333 GO:0003700
Prci3g1723 446 MobiDBLite consensus disorder prediction 26 40 - -
Prci3g1723 446 ProSiteProfiles R domain profile. 202 220 IPR017888 -
Prci3g1723 446 MobiDBLite consensus disorder prediction 135 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1723 Prci-Chr3 31672673 31681421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1723 55 446 TCP Transcription Factor Family AT4G18390 45.694 9.55e-81 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci3g1723 TCP 3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1723 - - jre:109011061 482.641