Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1709 ATGAGGCGGAATTGCAACCTGGAGCTTCGTCTTTTTCCTTCCGGCGATTCCTCTCACCTCCATGAGATGACTGAACAAGATAGTGAAAGCCCGCAGCAGAATCTGCAGAAGCTCACCATTTTCTACGACGGCAAGATGTGTATTTGCGATGTCACCGAGCTTCAGGCCAGATCGATCTTAATGCTTGCTAACAGAGAAATGAAAGGAAGAGCGAGGACACCAAACGGATCGGAGCCGTCTTCACCAAACACAGTGCCCTCGTACAGCCCAAGTAGTGGTCTCTCTATGAAGAGATCGCTGCAGAGTTTCCTCCAGAAGAGAAAGAATCGAATCCTTGAAGCTTCCCCCTACCATCACTAG 360 0.4944 MRRNCNLELRLFPSGDSSHLHEMTEQDSESPQQNLQKLTIFYDGKMCICDVTELQARSILMLANREMKGRARTPNGSEPSSPNTVPSYSPSSGLSMKRSLQSFLQKRKNRILEASPYHH 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1709 119 ProSiteProfiles Tify domain profile. 31 65 IPR010399 -
Prci3g1709 119 Pfam Jas motif 97 117 IPR018467 -
Prci3g1709 119 Pfam tify domain 33 64 IPR010399 -
Prci3g1709 119 SMART tify_2 31 65 IPR010399 -
Prci3g1709 119 MobiDBLite consensus disorder prediction 74 100 - -
Prci3g1709 119 MobiDBLite consensus disorder prediction 67 100 - -
Prci3g1709 119 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 23 117 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1709 Prci-Chr3 31554657 31556249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1709 1 118 Tify Gene Family AT1G30135 49.612 2.89e-33 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci3g1709 tify 3.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1709 - - tcc:18596482 150.214