LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci3g1681	ATGTTTTGGAAAAATTTGAAGCAATTTGGACTCTCTGCCAGAGAACTACGGGATATAGCATTCTCTCTTGTCAAATTATCCTGTTGTCTTCATGTCACCGCCACCTATCTCGTGGATCCTATTCAGATCTATGGTCCAAGCATGCTTCCGGTAATGGGTCCGATGCCTACCATTATATTGACCGAAAGGAACTCCCCCCGTTTGGGTAAAGTTGAGCGCGGGGATATTGTTATTGTGCGGTCACCTGAAAACCCTCGAAAGTTGATGTGCAAGCGCTTGCTTGGATTGGAGGGTGATGGTGTCACATTTCTCGTAGATCCTAAGAACAGTGATAAATGCGAGACTGTAGTGGTTCCCAAGGGACACGTTTGGGTTCAGGGAGATAACATATATAACTCCAGGGATTCAAGACAATTTGGTCCTGTTCCTTTCGGTCTTCTTCATGCCAAGGTCTTCTGGAGGTTATCGCCGCCTGGACCCTCGGGCAAAAACTGA	495	0.4667	MFWKNLKQFGLSARELRDIAFSLVKLSCCLHVTATYLVDPIQIYGPSMLPVMGPMPTIILTERNSPRLGKVERGDIVIVRSPENPRKLMCKRLLGLEGDGVTFLVDPKNSDKCETVVVPKGHVWVQGDNIYNSRDSRQFGPVPFGLLHAKVFWRLSPPGPSGKN	164

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci3g1681	164	Gene3D	Umud Fragment, subunit A	33	163	-	-
	Prci3g1681	164	SUPERFAMILY	LexA/Signal peptidase	35	162	IPR036286	-
	Prci3g1681	164	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	36	52	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Prci3g1681	164	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	118	137	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Prci3g1681	164	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	89	101	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Prci3g1681	164	PANTHER	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	15	158	-	-
	Prci3g1681	164	CDD	S26_SPase_I	40	151	IPR019533	GO:0004252\|GO:0006465
	Prci3g1681	164	Pfam	Signal peptidase, peptidase S26	18	103	IPR019533	GO:0004252\|GO:0006465
	Prci3g1681	164	Pfam	Signal peptidase, peptidase S26	112	153	IPR019533	GO:0004252\|GO:0006465
	Prci3g1681	164	FunFam	Inner membrane protease subunit 1	34	163	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci3g1681	Prci-Chr3	31157692	31159175	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci3g1681	48	157	MADS-box Gene Family	AT1G29960	53.636	1.45e-40	131

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci3g1681	K09647		-	nnu:104610480	197.208