Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1668 ATGTTTTGGAGAAATTTGAAGCAATTTGGACTCTCTGCCAGAGAACTACGGGATATGGCATTCTCTCTTGTCAAATTATCCTGTTGTCTTCATGTCACCGCCACCTATCTCGTGGATCCTATTCAGATCTATAGTCCTAGCATGCTTCCGGTAATGGGTCCGATGCCTACCATTATATTGACCGAAAGGAACTCCCCCCATTTTGGTAAAGTTAAGCGCGGGGATATTGTTATTGTGTGGTCACCTGAAAACCCTCGAAAGTTGATGTGCAAGCGCTTGCTTGGATTGGAGGGTGATGCTGTCACATTTCTTGTAGATCCTAATAATAGTGATAAATGCGAGACTGTAATGGTTCCCAAGGGACACGTTTGGGTTCAGGGAGATAACATATATAACTCCAGGGATTCAAGATAG 414 0.4372 MFWRNLKQFGLSARELRDMAFSLVKLSCCLHVTATYLVDPIQIYSPSMLPVMGPMPTIILTERNSPHFGKVKRGDIVIVWSPENPRKLMCKRLLGLEGDAVTFLVDPNNSDKCETVMVPKGHVWVQGDNIYNSRDSR 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1668 137 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 14 137 - -
Prci3g1668 137 CDD S26_SPase_I 40 137 IPR019533 GO:0004252|GO:0006465
Prci3g1668 137 Gene3D Umud Fragment, subunit A 33 137 - -
Prci3g1668 137 SUPERFAMILY LexA/Signal peptidase 35 137 IPR036286 -
Prci3g1668 137 Pfam Signal peptidase, peptidase S26 18 103 IPR019533 GO:0004252|GO:0006465
Prci3g1668 137 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci3g1668 137 PRINTS Bacterial leader peptidase 1 (S26A) family signature 36 52 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci3g1668 137 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1668 Prci-Chr3 27860229 27862540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1668 48 137 MADS-box Gene Family AT1G29960 51.111 1.32e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1668 K09647 - nnu:104585962 157.147