Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1667 ATGTGTAAACGCTCTGTCACAAATGGGTTCACGACTCTTCTTGAAAGTCGAAACTTGGTCTATATAAAGGCTTCTTCTAGTTCAGCATTTCCTCATATCTGCAGACTTGAGCTAAGCCAACCCATCTTCTCTGTCTTACATTCTTCAATGCTGATGTCTCCAAAAATCAGTTTGTCTATACTCATAGTCTTGTTCATTTCCGTTTCACCTATACATTCAAATGCAGAATCAAGCTCACTAGCAGTTGAAATTGAAGCTTTGAAAGCTTTCAAAAGCTCTATCACTCATGACCCAAATGGAGCATTGGCAGATTGGGTTGACACAACCCATCATTGCAACTGGTCCGGCATTGCTTGTGATCCGTCTTCACAACATGTCATATCACTCGCTCAGGTTGGCCAGAAGCTCCAAGAGATTTCACCATTCTTGGGCAACCTTTCGGGCCTCCAGGTTCTTGACTTAACCTCAAATTCATTCTCTGGGTTCATTCCTCCTCAGCTCAGCTTTTGCTCCCAACTTACTCAGTGGATTCTTTTTGACAACTCTCTCTCTGGTCCAATCCCAACAGAGGTAGGAAACTTGAAAGGTTTGCAGTATTTGGATTTGGGTAATAACAATCTGAACGGAAGCCTCCCAGAAAGCTTATTTAACTGCACCTCTTTGTTGAGTATTGCTTTCAATTCTAACAATCTGAATGGTAAAATCCCTTCAAGTATTGGCAATTTGGTTAACGTTACACAAATTGCAGGATTTGCTAATAAGTTTGTTGGATCTATTCCTTCTCCTGTCGGTAAGTTAAGGGCTTTACAGTCTCTAGATTTTAGTCAAAACCAATTGTCAGGAGAGATACCTGGAGAGATTGGGAATCTAGGAAACTTAGAATATCTTCTCCTGTTTGAAAATTCCTTGGTTGGAAAAATCCCTTCTGAACTTGGTCAATGCATGAAGCTAGTGAACCTTGAACTATACACAAGTCAGTTGTCTGGAAGCATTCCTTTCGAGATAGGAAACTTAGTTCATTTGGAAACATTAAGGATATATAGCAATAAGTTAAATTCTACAATCCCTTCTTCCCTTTTCCAGCTGAAATCATTAACCAACTTGGGTCTGTCACAAATGAGTAGAGAGAAAATATCTCCTGAAATTGGATCTTTAAGATCACTTAAAGTCCTAACGCTACATTCAAATAAGTTTACTGGACAAATTCCTTCATCAATCGTAAAGTTGACGAACTTAACTTATCTCTCAATGAGTCAGAATCTGCTTTCAGGTGAACTTCCTTCTAACATAGGATTGCTTCATAAATTGAAGTTTCTAATCCTGCACAACAACTTTTTTCATGGTGAAATCCCCCCCAGTATTGCCAATTGTACTGGTATGGTGAATGTTAGTTTAGCCTTTAATTCACTAAATGGGAAAATTCCTGTGGGCTTTTCAAGGATGCCTAATCTCACTTTCTTGTCTCTTACATCAAACAAAATGTCTGGTGAAATCCCAGATGATCTCTGGAACTGCTCAAGTCTTCGAACTCTAAGTTTGACTGACAACAATTTTAGTGGGAGGCTAAAACCTACTATCCAGAACCTGTTTAATCTCAGGATGCTTCAGCTGAATTTAAATTCTTTCACAGGGCCTATTCCACTTGAGATAGGGAGCTTAAATCAACTTTTGACATTAGCACTGTCAGATAATCGATTTTCTGGTCACATTCCATTAGAGATATCCAACCTCAGTCTTGTTCAGGGTCTCTACTTGCATGGTAATGTGTTAGAAGGCACAATACCAAATCAACTCTTTGAACTGAATCAACTAACCTAGCTTGACCTACATCAGAACAAGCTACTTGGTCAAATCCCAAAGGCTTTCTCCAAGCTTAGGATGCTTTCTTATTTAGACCTCCATGGGAACATGTTCAATGGATTAATTCCAAGAGAGTTGAGTCAGCTTAGCCAGCTCTTAATGTTAGATCTGTCACAGAATCATCTAGCAGGGTCGATTCCTGGAGATGTCATTGCACAGTTTAGAGACATGCAACTATATCTCAACTTGTCTCATAACCACTTTATTGGAGCTATACCAGAAGAGCTAGGTGCAATGGAGATGATTCAAGCCATTGATGTTTCAAACAACAATCTTTCTGGTGTCATTCCCAAGACACTTTCTGGGTGCAGAAATCTATTTAATCTTGATCTTTCAGGAAACAATATCTCAGGGCCTATTCCAGCAAAGGCTTTCAATGAGATGGACTTACTGCAAAGCTTGAACCTTTCAAGGAACAATTTCGATGGAGAAATTCCCGAGATATTGTCAAAGCTTGAGCATCTTACTTCGCTAGATCTTTCCCAGAATGACTTGAAGGGAACTATATCGAACAATTTCGCGAATCTCTCCAATCTAAAGCTTCTCAATGTTTCTTTTAACCAACTTGAAGGTCAAGTTCCATCAGGCGGAATATTCTCACGTATAGATGAATCTGAATTGATGGGAAACCCTGCTCTGTGTGGAACCAAATTTCTAGTGCCATGTAGGCAAACTCATTCACTATCCAAGAAGAGCATATCTATTATTGCCTCACTTGGATCTGTTGCTCTACTCCTAATTTTGGTTTTGGTAATTCTGTTTCTCATCCGAGGTGCCATATCACGTAATTCTGACAGGCTTGAGAATCTTGAAATACTAGACTACACATCAGCTTTGACACTTGAAAGATTTGATAGAAAGGACCTAGAAAATGCTACTAGTTCTTTCAGCTCAGATAACATCATTGGAGCGAGCAATTTGAGCACTGTTTACAAGGGCCAATTGGTAGATAGCAAAGTAGTGGCAATAAAAAAACTGAATTTGGACCATTTTTCTGCAGAAGCTGACAAACTTTTCAAGAGAGAAATAAGCATCTTGAGCCAACTAAGGCATAGGAATTTGGTCAAGGTTCTGGGGTACGCTTGGGAGAGTAGGAAAATAAAGGCTCTAGTTTTAGAGTACATGCAGAATGGGAATTTGGATAGCATAATACATGATGAAGAGATGGATCAATCTAGATGGACATTATCTGAAAGGCTCAATGTCTTCATTTCTGTTGCTGATGTGGATTACTTGCACTCTGGTTATGATATTCCAATTGTGCATTGTGATTTAAAGCCTTCCAATATACTTTTGGATGGAGATTGGGTGGCCCACGTGAGTGATTTTGGAACAGCTAGAATGCTTGGCCTCCATTCGCAAGATGATGCTTCTACTGTGTCCACATCAACAGTTTTCCAAGGCACTGTTGGTTATTTAGCACCAGAGCTTGCCTACATGAGGAAAGTAACGACCAAAGTCGATGTGTTCAGCTCTGGCATAATAGTAATGGAGTTTCTAACAAGTATGAGACCGACAGGGCTTACAGAAGTGGATGGCTTGCCAACAAGTCTACGTGAAACAGTGCAGAAAGCACTTGTGGATGGAACAGGGCACATGTTTTCATGTTGTGGATCCTATGCTCCTTGCGACGGACCATCTCCATCAGATGATGTCTTGGTGGAGCTATTGAAACTATCATTGAGTTGTACACTCCCTGATCCTGAAGAACGACCTTGCATGAATCATGTATTGTCCATCTTGATGATGCTCAAGAAGAAAATGTCATAG 3630 0.3997 MCKRSVTNGFTTLLESRNLVYIKASSSSAFPHICRLELSQPIFSVLHSSMLMSPKISLSILIVLFISVSPIHSNAESSSLAVEIEALKAFKSSITHDPNGALADWVDTTHHCNWSGIACDPSSQHVISLAQVGQKLQGXISPFLGNLSGLQVLDLTSNSFSGFIPPQLSFCSQLTQWILFDNSLSGPIPTEVGNLKGLQYLDLGNNNLNGSLPESLFNCTSLLSIAFNSNNLNGKIPSSIGNLVNVTQIAGFANKFVGSIPSPVGKLRALQSLDFSQNQLSGEIPGEIGNLGNLEYLLLFENSLVGKIPSELGQCMKLVNLELYTSQLSGSIPFEIGNLVHLETLRIYSNKLNSTIPSSLFQLKSLTNLGLSQMSXREKISPEIGSLRSLKVLTLHSNKFTGQIPSSIVKLTNLTYLSMSQNLLSGELPSNIGLLHKLKFLILHNNFFHGEIPPSIANCTGMVNVSLAFNSLNGKIPVGFSRMPNLTFLSLTSNKMSGEIPDDLWNCSSLRTLSLTDNNFSGRLKPTIQNLFNLRMLQLNLNSFTGPIPLEIGSLNQLLTLALSDNRFSGHIPLEISNLSLVQGLYLHGNVLEGTIPNQLFELNQLTXLDLHQNKLLGQIPKAFSKLRMLSYLDLHGNMFNGLIPRELSQLSQLLMLDLSQNHLAGSIPGDVIAQFRDMQLYLNLSHNHFIGAIPEELGAMEMIQAIDVSNNNLSGVIPKTLSGCRNLFNLDLSGNNISGPIPAKAFNEMDLLQSLNLSRNNFDGEIPEILSKLEHLTSLDLSQNDLKGTISNNFANLSNLKLLNVSFNQLEGQVPSGGIFSRIDESELMGNPALCGTKFLVPCRQTHSLSKKSISIIASLGSVALLLILVLVILFLIRGAISRNSDRLENLEILDYTSALTLERFDRKDLENATSSFSSDNIIGASNLSTVYKGQLVDSKVVAIKKLNLDHFSAEADKLFKREISILSQLRHRNLVKVLGYAWESRKIKALVLEYMQNGNLDSIIHDEEMDQSRWTLSERLNVFISVADGXDYLHSGYDIPIVHCDLKPSNILLDGDWVAHVSDFGTARMLGLHSQDDASTVSTSTVFQGTVGYLAPELAYMRKVTTKVDVFSSGIIVMEFLTSMRPTGLTEVDGLPTSLRETVQKALVDGTGHMFSCCGSYAPCDGPSPSDDVLVELLKLSLSCTLPDPEERPCMNHVLSILMMLKKKMS 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1667 1212 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 235 334 - -
Prci3g1667 1212 FunFam Leucine-rich repeat receptor-like protein kinase TDR 410 672 - -
Prci3g1667 1212 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 880 996 - -
Prci3g1667 1212 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 604 1205 - -
Prci3g1667 1212 Gene3D Ribonuclease Inhibitor 681 852 IPR032675 -
Prci3g1667 1212 Gene3D Ribonuclease Inhibitor 315 478 IPR032675 -
Prci3g1667 1212 Gene3D Ribonuclease Inhibitor 242 314 IPR032675 -
Prci3g1667 1212 Gene3D Phosphorylase Kinase; domain 1 882 996 - -
Prci3g1667 1212 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 80 234 - -
Prci3g1667 1212 SMART LRR_typ_2 387 411 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 291 315 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 435 459 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 267 290 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 555 579 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 701 724 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 339 363 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 147 171 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 627 650 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 750 773 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 603 626 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 651 675 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 798 823 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 774 797 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 483 507 IPR003591 -
Prci3g1667 1212 SMART LRR_typ_2 195 219 IPR003591 -
Prci3g1667 1212 SUPERFAMILY L domain-like 596 852 - -
Prci3g1667 1212 SMART serkin_6 918 1206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1667 1212 Pfam Leucine rich repeat 683 738 IPR001611 GO:0005515
Prci3g1667 1212 Pfam Leucine rich repeat 605 664 IPR001611 GO:0005515
Prci3g1667 1212 Pfam Leucine rich repeat 464 520 IPR001611 GO:0005515
Prci3g1667 1212 Pfam Leucine rich repeat 753 811 IPR001611 GO:0005515
Prci3g1667 1212 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 673 848 - -
Prci3g1667 1212 SUPERFAMILY Protein kinase-like (PK-like) 900 1206 IPR011009 -
Prci3g1667 1212 Gene3D Transferase(Phosphotransferase) domain 1 997 1212 - -
Prci3g1667 1212 Gene3D Ribonuclease Inhibitor 81 239 IPR032675 -
Prci3g1667 1212 Gene3D Ribonuclease Inhibitor 479 573 IPR032675 -
Prci3g1667 1212 Pfam Leucine Rich Repeat 150 171 IPR001611 GO:0005515
Prci3g1667 1212 SUPERFAMILY L domain-like 82 357 - -
Prci3g1667 1212 Pfam Leucine rich repeat N-terminal domain 83 120 IPR013210 -
Prci3g1667 1212 Gene3D Ribonuclease Inhibitor 574 680 IPR032675 -
Prci3g1667 1212 SUPERFAMILY L domain-like 374 669 - -
Prci3g1667 1212 Pfam Protein kinase domain 920 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1667 1212 ProSiteProfiles Protein kinase domain profile. 918 1207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1667 1212 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1043 1055 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1667 Prci-Chr3 27835339 27839637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1667 79 1210 Receptor kinase-like Gene Family AT5G46330 51.926 0.0 1087
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci3g1667 Pkinase 2.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1667 K13420 - gmx:100817960 1488.4