Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1658 ATGTCACTTTCCTGTGCAAAAAACTTCTTCCGGAGGTTCTGGGTTGATGAATTCCAAATGGGAAGTTTTGCACATAGCAGCTTTCTGTCTAACGATCTCCTGCCATCCCTTGGAGCCCGAATCAACCAAGAAACTAGACTACGAAGATACATAATCTCCCCTTTCAACCCCTGGTATAGGACTTGGGAGATGTTACTGATTATTCTGGTCATCTACTCAGCCTGGATTTGCCCCTTTGAGTTTGCCTTTCTTCCTTACAAGCAAGATGCATTATTTATCATCGACAACACTGTCAATGGCTTCTTTGCCATTGACATCGTCCTGACATTCTTTGTTGCATATCTAGATAGCCACTCTTACCTTCTTGTTGACGATCACAAGAAAATTGCAGCAAGGTACCTCTCCTCCTGGTTCATTTTTGATGTCTGCTCAACGGCACCATTTCAGTCCATCAGCCTACTCTTCACTAAACATAGTGGCGAGCTCGGCTTTAAACTGCTTAACATGCTTCGCTTATGGCGTCTGAGACGCGTGAGCTTTCTGTTTGCAAGGCTTGAGAAAGACATCCGCTTCAATTATTTCTGGACAAGGTGCACAAAGCTCATTTCTGTAACCTTGTTTGCAGTGCACTGTGCCGGGTGCTTTAACTATCTGCTTGCAGATAGGTACCCTGATTCTAAAAAGACCTGGATTGGTGCTGTGTACCCAAATTATAAAGAACTAAGTCTCTGGGACAGATATGTGACTTCAATATATTGGTCCATTGTCACACTTACAACTACTGGGTACGGGGACTTGCATGCTGAAAACACAGGGGAGATGCTGTTTGATATCTTCTACATGCTGTTCAACTTGGGATTAACGTCATATATTATTGGAAACATGACAAACCTTGTAGTCCACTGGACCAGCCGCACCAGAAATTTTAGAGACACAGTAAGAGCAGCTTCAGAATTTGCTTCAAGAAACCATTTGCCCCATCATATACAAGATCAAATGTTGTCGCACTTGTGTTTGAAATTTAAAACGGAAGGATTGAAGCAACAAGAAACACTAAATGGTCTGCCTAAGGCGATTCGTTCAAGCATTGCATACCATCTATTTTTTCCCATACTGCAGAAGGTCTACCTCTTCCAAGGAGTTTCTCATGACCTTCTTTTCCAACTGGTTTCAGAAATAGAAGCAGAATATTTCCCACCCAAGGAAGAAGTGATCCTGCAAAACGAGTCTCCAACAGACCTTTATGTACTGGTTTCAGGGGCGGTGGATATTATTCGCTACATTGATGGACGAGATCAAGTTCTTGGCAAGGCAATTGGAGGAGATACATTTGGTGAGATCGGGGTTTTATACAACAGACCACAGCCTTTCACAATTCGGACAGTAGAGCTTTCTCAAGTATTAAGACTTGGCAGAATTTCCTTAATGAATGCCGTACAAGCAGCCCCAGAAGATGCACAAATTATAAGGAATAACCTTTTCATGAGATTTAGGGGACAAGGCCTGGGTTCTGAATATGTCCATGAAATGCTTTATGGAACAAGAAAAGGAGGCTTTGCTAAAAATTCAAATGGAAATTCCATAGTGAATGAAGGAGAATACAAAGATTTTACAGAGTCGGACGATGCTATTCATGCTGCTGCAAAGGACAGTCAACAAAATATGGTTGAAATTTTGCTCCAGAGAGACACAAATGTAAAGAACCCAAATTCCCAACCATGGACACCGAAAGTTCCCATAGAGCAGCAACAAAACAAGAGCATTTCTGACCTCTTTATCAGTGGTGAAAATAGGAGGAAATCAGATAAATATAGAATAGAGTTGGCGGCTAGGAATGATCTAACCAGAACCAGAAGCCATGATGGTCTTGGCCCCATCGGCTTTCCAATAGAAAAAGCATACCCAACCACTTATTCAGGAAATACCAATGGCCTAGGTGATATAGAAATGGCAAAATGCACGAAAAAGAGAGTTACCATCCACCTGATCTGTGAACACTGTAGTACTGCACAGGGGCATGGGAAATTGATACTTTTGCCTGATTCTTTAGAAGAGCTGCTCAAGGTTGCTGGTCACAAATTTGAAGGCTCCAAACCTACAAATGTCGTTACTGCACAAAATGCAGAGATAGATGACATAAGTGTCATTCAAGATGGTGATAATCTCTTTCTTCTTTGCAGTGATAGAGAACATTTGAGTTCATGA 2205 0.4186 MSLSCAKNFFRRFWVDEFQMGSFAHSSFLSNDLLPSLGARINQETRLRRYIISPFNPWYRTWEMLLIILVIYSAWICPFEFAFLPYKQDALFIIDNTVNGFFAIDIVLTFFVAYLDSHSYLLVDDHKKIAARYLSSWFIFDVCSTAPFQSISLLFTKHSGELGFKLLNMLRLWRLRRVSFLFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCFNYLLADRYPDSKKTWIGAVYPNYKELSLWDRYVTSIYWSIVTLTTTGYGDLHAENTGEMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAASEFASRNHLPHHIQDQMLSHLCLKFKTEGLKQQETLNGLPKAIRSSIAYHLFFPILQKVYLFQGVSHDLLFQLVSEIEAEYFPPKEEVILQNESPTDLYVLVSGAVDIIRYIDGRDQVLGKAIGGDTFGEIGVLYNRPQPFTIRTVELSQVLRLGRISLMNAVQAAPEDAQIIRNNLFMRFRGQGLGSEYVHEMLYGTRKGGFAKNSNGNSIVNEGEYKDFTESDDAIHAAAKDSQQNMVEILLQRDTNVKNPNSQPWTPKVPIEQQQNKSISDLFISGENRRKSDKYRIELAARNDLTRTRSHDGLGPIGFPIEKAYPTTYSGNTNGLGDIEMAKCTKKRVTIHLICEHCSTAQGHGKLILLPDSLEELLKVAGHKFEGSKPTNVVTAQNAEIDDISVIQDGDNLFLLCSDREHLSS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1658 734 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Prci3g1658 734 Gene3D Jelly Rolls 344 501 IPR014710 -
Prci3g1658 734 ProSiteProfiles Ankyrin repeat profile. 539 571 IPR002110 GO:0005515
Prci3g1658 734 CDD CAP_ED 377 489 IPR000595 -
Prci3g1658 734 Pfam KHA, dimerisation domain of potassium ion channel 656 724 IPR021789 -
Prci3g1658 734 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci3g1658 734 PANTHER POTASSIUM CHANNEL AKT1 25 498 IPR045319 GO:0005249|GO:0006813
Prci3g1658 734 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1658 734 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1658 734 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1658 734 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1658 734 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1658 734 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g1658 734 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Prci3g1658 734 FunFam Potassium channel KAT3 61 301 - -
Prci3g1658 734 FunFam Potassium channel KAT2 365 501 - -
Prci3g1658 734 SUPERFAMILY cAMP-binding domain-like 304 496 IPR018490 -
Prci3g1658 734 Gene3D - 60 300 - -
Prci3g1658 734 ProSiteProfiles KHA domain profile. 657 734 IPR021789 -
Prci3g1658 734 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Prci3g1658 734 SMART cnmp_10 377 494 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1658 Prci-Chr3 27749508 27753800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1658 1 724 Ion Channels AT5G46240 60.773 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1658 K21867 - gmx:100800340 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1658 3 27749508 27753800 Prci3g1658 3 27749508 27753800 ECH