LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci3g1643	ATGTTTTGGAGAAATTTGAAGCAATTTGGACTCTCTGCCAGAGAACTACGGGATATGGCATTCTCTCTTGTCAAATTATCCTGTTGTCTTCATGTCACCGCCACCTATCTCGTGGATCCTATTCAGATCTATGGTCCTAGCATGCTTCCGGTAATGGGTCCGATGCCTACCATTATATTGACCGAAAGGAACTCCCCACGTTTTGGTAAAGTTGAGCGCGGGGATATTGTTATTGTGCGGTCACCTGAAAACCCTCGAAAGTTGATGTGCAAGCGCTTGCTTGGATTGGAGGGTGATGGTGTCACATTTCTCGTCGATCCTAAGTATAGTGATAAATGCGAGACTGTAGTGGTTCCCAAGGGACACGTTTGGGTTCAGGGAGATAACATATATAACTCCAGGGATTCAAGACAATTTGGTCCTGTTCCTTACGGTCTTCTTCATGCCAAGGTCTTCTGGAGGTTATCGCCGCCTGGACCCTTGGGCAAAAACTGA	495	0.4646	MFWRNLKQFGLSARELRDMAFSLVKLSCCLHVTATYLVDPIQIYGPSMLPVMGPMPTIILTERNSPRFGKVERGDIVIVRSPENPRKLMCKRLLGLEGDGVTFLVDPKYSDKCETVVVPKGHVWVQGDNIYNSRDSRQFGPVPYGLLHAKVFWRLSPPGPLGKN	164

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci3g1643	164	FunFam	Inner membrane protease subunit 1	34	163	-	-
	Prci3g1643	164	SUPERFAMILY	LexA/Signal peptidase	35	162	IPR036286	-
	Prci3g1643	164	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	36	52	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Prci3g1643	164	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	118	137	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Prci3g1643	164	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	89	101	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Prci3g1643	164	PANTHER	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	14	159	-	-
	Prci3g1643	164	Gene3D	Umud Fragment, subunit A	33	161	-	-
	Prci3g1643	164	Pfam	Signal peptidase, peptidase S26	113	153	IPR019533	GO:0004252\|GO:0006465
	Prci3g1643	164	Pfam	Signal peptidase, peptidase S26	18	103	IPR019533	GO:0004252\|GO:0006465
	Prci3g1643	164	CDD	S26_SPase_I	40	151	IPR019533	GO:0004252\|GO:0006465

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci3g1643	Prci-Chr3	27612720	27615040	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci3g1643	48	162	MADS-box Gene Family	AT1G29960	54.237	6.00e-42	134

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci3g1643	K09647		-	mof:131144865	196.438