Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1642 ATGTTTTGGAGAAATTTGAAGCAATTTGGACTCTCTGCCAGAGAACTACGGGATATGGCATTCTCTCTTGTCAAATTATCCTGTTGTCTTCATGTCACCGCCACCTATCTCGTGGATCCTATTCAGATCTATGGTCCTAGCATGCTTCCGGTAATGGGTCCGATGCCTACCATTATATTGACCGAAAGGAACTCCCCACGTTTTGGTAAAGTTGAGCGCGGGGATATTGTTATTGTGCGGTCACCTGAAAACCCTCGAAAGTTGATGTGCAAGCGCTTGCTTGGATTGGAGGGTGATGGTGTCACATTTCTCGTCGATCCTAAGTATAGTGATAAATGCGAGACTGTAGTGGTACCGTTGATTTCCCATGTTCCCAAGGGACACGTTTGGGTTCAGGGAGATAACATATATAACTCCAGGGATTCAAGACAATTTGGTCCTGTTCCTTACGGTCTTCTTCATGCCAAGGTCTTCTGGAGGTTATCGCCGCCTGGACCCTTGGGCAAAAACTGA 513 0.4639 MFWRNLKQFGLSARELRDMAFSLVKLSCCLHVTATYLVDPIQIYGPSMLPVMGPMPTIILTERNSPRFGKVERGDIVIVRSPENPRKLMCKRLLGLEGDGVTFLVDPKYSDKCETVVVPLISHVPKGHVWVQGDNIYNSRDSRQFGPVPYGLLHAKVFWRLSPPGPLGKN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1642 170 Pfam Signal peptidase, peptidase S26 118 159 IPR019533 GO:0004252|GO:0006465
Prci3g1642 170 Pfam Signal peptidase, peptidase S26 18 103 IPR019533 GO:0004252|GO:0006465
Prci3g1642 170 NCBIfam signal peptidase I 30 163 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci3g1642 170 SUPERFAMILY LexA/Signal peptidase 35 168 IPR036286 -
Prci3g1642 170 CDD S26_SPase_I 40 157 IPR019533 GO:0004252|GO:0006465
Prci3g1642 170 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 14 165 - -
Prci3g1642 170 Gene3D Umud Fragment, subunit A 33 167 - -
Prci3g1642 170 PRINTS Bacterial leader peptidase 1 (S26A) family signature 36 52 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci3g1642 170 PRINTS Bacterial leader peptidase 1 (S26A) family signature 124 143 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci3g1642 170 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci3g1642 170 FunFam Inner membrane protease subunit 1 34 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1642 Prci-Chr3 27612718 27615040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1642 48 168 MADS-box Gene Family AT1G29960 51.613 2.88e-39 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1642 K09647 - mof:131144865 189.889