Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1640 ATGGCTGCCTCTACTATGGCTCTCTCCTCCCCAACTTTTGCCGGTGAGGCACTCGAGGTGTCTCCGGCTCATTTAGGTGTCGGCCGGATTTCCATGAGGAGGGCTGTCAAGCCTGCTGGTCCTTCTGGAAGCCCGTGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGCCTCCATCCTACTTGACTGGTGAGTTCCCAGGTGATTATGGCTGGGACACTGCTGGGCTGTCAGCTGATCCAGAGACTTTTGCTAGAAACCGTGAGCTTGAAGTCATTCATGCGAGATGGGCTATGCTTGGAGCTTTGGGTTGTGTCTTCCCTGAGCTCTTGGCCCGTAATGGTGTCAAATTCGGTGAGGCTGTATGGTTCAAGGCCGGATCTCAGATCTTTAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAACTTGATTCATGCACAAAGCATTCTTGCAATTTGGGCTTGCCAAGTGATCTTGATGGGTGCCGTTGAGGGATACCGCATTGCCGGTGGGCCTCTCGGTGAGGTGACAGACCCACTCTACCCAGGTGGAAGCTTTGATCCATTGGGCCTTGCAGATGACCCGGAGGCTTTTGCTGAGCTGAAGGTGAAGGAGATCAAGAATGGTAGATTGGCCATGTTCTCAATGTTTGGCTTCTTTGTTCAAGCCATTGTGACTGGAAAGGGACCTCTGGAGAACCTTGCAGACCATCTTGCAGACCCAGTGAACAACAATGCTTGGGCTTATGCTACAAACTTTGTCCCCGGAAAGTGA 789 0.5285 MAASTMALSSPTFAGEALEVSPAHLGVGRISMRRAVKPAGPSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHARWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1640 262 SUPERFAMILY Chlorophyll a-b binding protein 45 259 - -
Prci3g1640 262 Gene3D Chlorophyll a/b binding protein domain 53 255 - -
Prci3g1640 262 FunFam Chlorophyll a-b binding protein, chloroplastic 53 255 - -
Prci3g1640 262 Pfam Chlorophyll A-B binding protein 62 228 IPR022796 -
Prci3g1640 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 262 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1640 Prci-Chr3 27590562 27591585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1640 1 262 Chloroplast and Mitochondria Gene Families AT2G34430 88.346 2.51e-173 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1640 K08912 - pvy:116138027 503.827