Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1634 ATGTCTGATGAACCCAGTAAGGAACTTTACTACAGAGATCTTTTCTTAGGCCATCATAATCAGCAGGCCTCGAGTGGATCTGCCATGTTCTGTGAGAAGAACTTGTCTTCCTTTCATATTCCTGGCCCTTCATCATCGTCAGGCTTTGATGATGATTCTCCATATATGAGCTTCACTGAATGCCTGCAAGGAGGCCTGGACTACAATTCTCTCGCTAGCTCCTTTGGCTTGTCTCCTTCCTCCTCCGAGGTTTTCTCTTCTGATCAGAAGCCAGCTGCAGATGCTCCTGGAGATTTAGGCGGTGGTGGGAGTGAAACGCCTGTGACGACCACCCAGAATTCATCCATCTCTAATTCATCTTCTTCGGAAGGTGCAGCTGAAGAGGAAGACTCGGGGAAGAGCAAGAAAGATAGTGATCAGGTCAAAGCAGAAGAAGGGTCTAACAAGAAAGGGAACAAAGGCAGGAAGAAAGGAGAGAAGAAGCAGAAGGAGCCCAGGTTTGCCTTCATGACCAAGAGCGAGGTCGATCACCTCGAAGATGGTTACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCCTACCCAAGAAGCTACTACAGGTGCACGACGCAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATATCAAGACCCAACCACTGTGATAACAACGTATGAGGGTCAGCACAACCATCCAGTCCCCACATCGCTGAGAGGGAATGCGGCCGCAATGTTCACACCTTCTTCTCTCCTAGCACCACACTCTCCTTCATCACTCGCCGCCGCCGCCGCCGCCGCCCACCACCACCACGATCTCTTTCTTCACATGCCTCATCACTTCAACACCCCAAGTATTAGTACTGCTTCAGCCGCTGCTTATAACAATAACAGCAATCTTATTAACAGTACCACTGCTTCTTCTCTTCTTCAGCAGCAGTATCATCATCATCATCATCTTCCTCCTCATGACTACGGCCTCCTCCAGGACATTCTTCCCTCCATGTTCCTCAGACAAGATCATCCCTAG 1038 0.4923 MSDEPSKELYYRDLFLGHHNQQASSGSAMFCEKNLSSFHIPGPSSSSGFDDDSPYMSFTECLQGGLDYNSLASSFGLSPSSSEVFSSDQKPAADAPGDLGGGGSETPVTTTQNSSISNSSSSEGAAEEEDSGKSKKDSDQVKAEEGSNKKGNKGRKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYQDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSSLLAPHSPSSLAAAAAAAHHHHDLFLHMPHHFNTPSISTASAAAYNNNSNLINSTTASSLLQQQYHHHHHLPPHDYGLLQDILPSMFLRQDHP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1634 345 FunFam WRKY transcription factor 57 164 238 - -
Prci3g1634 345 Gene3D WRKY domain 162 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1634 345 MobiDBLite consensus disorder prediction 72 169 - -
Prci3g1634 345 MobiDBLite consensus disorder prediction 126 152 - -
Prci3g1634 345 ProSiteProfiles WRKY domain profile. 173 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1634 345 Pfam WRKY DNA -binding domain 179 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1634 345 MobiDBLite consensus disorder prediction 104 125 - -
Prci3g1634 345 MobiDBLite consensus disorder prediction 72 88 - -
Prci3g1634 345 SUPERFAMILY WRKY DNA-binding domain 170 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1634 345 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 109 288 IPR044810 GO:0003700
Prci3g1634 345 SMART WRKY_cls 178 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1634 Prci-Chr3 27495601 27497697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1634 45 343 WRKY Transcription Factor Family AT4G18170 49.508 2.79e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g1634 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1634 - - gmx:100787050 303.138