Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1592 ATGGCACAAGGATCAACAGATTCATCGGGAAACCAGAGAGTTCCCTTTCACAAGCTCTTTACTTTCGCGGACCGTCCCGACGTGGTCTTGATGATCATCGGTACGATCTGTGCGTTGGCCAATGGATTATCACAGCCTCTCATGACACTGATTTTTGGGAAGCTCATCAACACGTTTGGTTCGACTGATCAACCACGCATTGTGCGTGAAGTTTCTAAGGTTGCATTACTCTTTGTATACCTGGCTATTGGTTCTGGCGTTGCTTCAAGTCTCCAGGTAGCTAGTTGGATGGTGACAGGAGAAAGGCAAGCCGCACGGATTCGTGGTCTGTACTTGAAAACAATATTAAGACAGGATATTGCATTCTTCGACACTGAAACAACCACAGGAGAGGTCATTGGTAGGATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGCGAAAAGGTGGGGAAGTCTCTGCAACTTGCTTCAACTTTTGTCGGCGGTTTTGTGGTTGCCTTTACAAGAGGATGGTTACTTGCTCTGGTTTTGCTTTCATGTGTTCCATGTGTTGTCATTGCTGGTGGAATTTCGTCAATGTTTGTGGCAAAAATGTCAAGTCGTGGACAACTTGCTTATGCAGAAGCAGGAAACGTGGTTGAACAAACCGTTGGAGCTATTAAAACAGTTGCATCTTTCACTGGGGAGAAGAAAGCAGTAGAAACGTATAATAGCAAGTTGAAAGTCGCCTATAAAACAATGGTTAAACAAGGGATGGCCACGGGGCTTGGATTTGGAGTTGTTTTGTTTATAATCTTCAGCACTTATGGACTTGCAATGTGGTATGGAGCCAAGCTGATCCGCGAGAGAGGGTACAATGGTGGAGCTGTCATCACTATAATTATGGCGCTTATGACGGGTGGAATGGCACTGGGACAGACATCGCCAAGTCTCAATGCATTCGCAGCAGGTCAAGCTGCGGCATACAAGATGTTTGAGACTATTGAAAGAAAACCCAAAATTGATGCTTATAACACTAATGGGGCTGTCTTGGAGGACATCAAGGGAGATATTGAACTTAAAGATGTTTATTTCAGATACCCTGCAAGGCCAGACGTGCAGGTTTTTGCTGGATTCTCACTGCATGTTCCAAGAGGCACGACCAGCGCTTTAGTGGGTCAAAGTGGAAGCGGAAAGTCAACTGTAATTAGTTTATTAGAAAGATTCTATGACCCTGATGCTGGTGAAGTATTTATAGATGGTGTTAATTTGAGGGACTTCAAACTTAAGTGGATAAGAGAAAAGATTGGGCTTGTTAGTCAGGAACCGATGTTATTTACAGGTACCATCAAAGAAAATATAGCATATGGCAAGGATAATGCAACTGATGATGAAATAACTACAGCGACAAAGCTTGCCAACGCTGCAAAATTTATCGACAAAATGCCAAAGGGACTTGACACCATGGTAGGGGAGCATGGAACTCAACTTTCCGGGGGACAAAAGCAACGGATTGCCATTGCAAGGGCAATTCTGAAGAACCCTAAAATCCTCCTTCTTGATGAAGCAACAAGCGCACTAGATGCTGAGTCTGAACGCATTGTTCAAGATGCATTGGTAAATGTCATGTTAAACAGGACCACAGTGGTTGTTGCTCATCGTTTGACAACTATTAGAAATGCTGATGCAATAGCAGTGGTGTATCAAGGGAAAATAGTGGAAAAAGGAACTCATGATGAGTTAATCCAGAATCCTGATGGTGCTTATTCTCAGCTTGTTCGTCTCCAAGAAGGTGCAGATAAAGCTGAAGCTGGAGAAAAATCGGAAACAGATAAGGCCACTACCAGTTATATAGACAGAAACATTTCTTCCTCTGAGAACCAAAAATCATGGTTGAGATCATTTAGAAGAATTTCATCAGGAAGGCAATCTTCTCACTCACTTAGCCTTGATCTAGCTAATCGAACTAATACATATCCTTCTGGAGAAGGTGATGATCCTGGAAAACCCAAATCTGCAAATGTCAAGCGGCAAGAGGTTTCCATTATGCGCTTGGCCTATTTGAACAAAACTGAGATTCCTGTGTTATTGCTTGGATCAGTTGCAGCTGCAATACAAGGCCTAGTTTTCCCTATATTTGGCCTCCTGCTTTCATCAGCTATTAGAATGTTATATAAACCACCTGAACAAATGAGGAAAGAATCAAAATTTTGGGGAGTTCTTTATGTGATTTTGGGTTTAGTTTCTTTAGTGACTCTACCGTTACAAAATTACTTCTTTGGAGTTGCTGGTGGAAAATTAATAGAACGAATTCGTTCTTTGACATTTGAGAAGGTTGTGCACCAGCAAATCAGTTGGTTTGATGATCCTGCAAATTCAAGTGGTGCAGTAGGTGCAAGGTTATCTACAGATGCCTCAACTGTGAGAAGTCTTGTTGGCGACACCTTGGCCCTTATTGTGCAGAACATAGCAACAATAACAACAGGCCTCCTTATAGCATTTTTAGCTAATTGGAGACTCTCTTTTGTGGTTCTTGCTGTGTCACCTTTGATTCTTTTGCAAGGAGTATTTCAGATGAGGTTTCTGAAAGGGTTTAGTGCAGATGCTAAGCTGATGTATGAAGAGGCCAGTCAGGTGGCAAATGATGCAGTTGGTAGCATTAGGACTGTTGCATCATTCTGTGCTGAGCCGAAGGTCATGGAAATGTATAGGAAGAAATGTGAGGGGCCAGAAAAACAAGGCATTCGACTAGGTTTTGTTAGCGGTGTTGGTTATGGCTTCTCCTTCTTTGCTTTATACTGCACAAATGCCCTGTGTTTCTACGTAGGATCCATCTTTGTAAAGAAAGGGTTAGCAAATTTTGGACAGGTTTTCAAGGTTTTCTTTGCTTTAACGATTACAGCAATAGGGGTTTCCCAGACGAGTGCCTGGGCACCAGACACCAACAAGGCCAAGGACTCCACAGCTTCAATATTTAAAATCCTAGACAGTAAACCCAGCATTGACTCTAGTGGCGATGAGGGCATGACATTAGATTCTGTGAATGGTGAAATTGAACTCAGAAATGTTAGCTTCAAATACCCAACAAGGCCAGATGTTCAAATTTTCAGAGAACTGAACCTAACCATACCCTCTGGAAAGACTGTTGCTCTGGTTGGAGAAAGTGGCAGTGGAAAATCTACAGTTATAAGTCTCCTTGAGAGATTTTATGACCCTGATTCTGGACTTGTACTGCTAGATGGAATCGACAAGGAGTTGAGATTAAGTTGGTTGAGACAGCAGATGGGTTTGGTTAGTCAAGAGCCAATTCTTTTCAATGAAACTATCCGAGACAACATAGCTTATGGCAAAATAAGAGGTGCAAATGAGGAAGAGATAGTTGCAGCAGCAAAAGCAGCCAACGCATACACGTTCATAAGTTCACTTCCAAGTGGATTTGACACCTTTGTTGGGGAGAGAGGCACACAATTGTCAGGAGGGCAAAAGCAGAGGATAGCCATTGCAAGAGCCATATTGAAAAACCCAAGAATCCTTTTGCTTGACGAGGCAACCAGTGCATTAGATGCAGAGTCTGAACGTGTAGTTCAAGAAGCCTTAGACAATGTTACGGTGAATAGAACTACTGTAGTGGTAGCTCATCGTCTCTCCACAATTAAAGGTGCCGACGTCATAGCAGTAGTGAAGAATGGAAAGATTGCTGAGAAGGGAATCCATGACTCCTTGATGAAGATTAATGGTGGTGTTTATGCTTCGTTGGTCGCTCTGCATATGAGTGCATCATAA 3768 0.4273 MAQGSTDSSGNQRVPFHKLFTFADRPDVVLMIIGTICALANGLSQPLMTLIFGKLINTFGSTDQPRIVREVSKVALLFVYLAIGSGVASSLQVASWMVTGERQAARIRGLYLKTILRQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKSLQLASTFVGGFVVAFTRGWLLALVLLSCVPCVVIAGGISSMFVAKMSSRGQLAYAEAGNVVEQTVGAIKTVASFTGEKKAVETYNSKLKVAYKTMVKQGMATGLGFGVVLFIIFSTYGLAMWYGAKLIRERGYNGGAVITIIMALMTGGMALGQTSPSLNAFAAGQAAAYKMFETIERKPKIDAYNTNGAVLEDIKGDIELKDVYFRYPARPDVQVFAGFSLHVPRGTTSALVGQSGSGKSTVISLLERFYDPDAGEVFIDGVNLRDFKLKWIREKIGLVSQEPMLFTGTIKENIAYGKDNATDDEITTATKLANAAKFIDKMPKGLDTMVGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVNVMLNRTTVVVAHRLTTIRNADAIAVVYQGKIVEKGTHDELIQNPDGAYSQLVRLQEGADKAEAGEKSETDKATTSYIDRNISSSENQKSWLRSFRRISSGRQSSHSLSLDLANRTNTYPSGEGDDPGKPKSANVKRQEVSIMRLAYLNKTEIPVLLLGSVAAAIQGLVFPIFGLLLSSAIRMLYKPPEQMRKESKFWGVLYVILGLVSLVTLPLQNYFFGVAGGKLIERIRSLTFEKVVHQQISWFDDPANSSGAVGARLSTDASTVRSLVGDTLALIVQNIATITTGLLIAFLANWRLSFVVLAVSPLILLQGVFQMRFLKGFSADAKLMYEEASQVANDAVGSIRTVASFCAEPKVMEMYRKKCEGPEKQGIRLGFVSGVGYGFSFFALYCTNALCFYVGSIFVKKGLANFGQVFKVFFALTITAIGVSQTSAWAPDTNKAKDSTASIFKILDSKPSIDSSGDEGMTLDSVNGEIELRNVSFKYPTRPDVQIFRELNLTIPSGKTVALVGESGSGKSTVISLLERFYDPDSGLVLLDGIDXKELRLSWLRQQMGLVSQEPILFNETIRDNIAYGKIRGANEEEIVAAAKAANAYTFISSLPSGFDTFVGERGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALDNVTVNRTTVVVAHRLSTIKGADVIAVVKNGKIAEKGIHDSLMKINGGVYASLVALHMSAS 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1592 1256 MobiDBLite consensus disorder prediction 594 609 - -
Prci3g1592 1256 CDD ABC_MTABC3_MDL1_MDL2 353 591 - -
Prci3g1592 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1002 1250 IPR027417 -
Prci3g1592 1256 FunFam ABC transporter B family member 9 18 349 - -
Prci3g1592 1256 SUPERFAMILY ABC transporter transmembrane region 679 997 IPR036640 GO:0005524|GO:0016020
Prci3g1592 1256 Pfam ABC transporter transmembrane region 31 300 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci3g1592 1256 Pfam ABC transporter transmembrane region 692 963 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci3g1592 1256 MobiDBLite consensus disorder prediction 588 615 - -
Prci3g1592 1256 CDD ABC_6TM_Pgp_ABCB1_D2_like 681 996 - -
Prci3g1592 1256 Gene3D - 1003 1255 IPR027417 -
Prci3g1592 1256 FunFam ABC transporter B family member 1 343 592 - -
Prci3g1592 1256 ProSitePatterns ABC transporters family signature. 492 506 IPR017871 GO:0005524|GO:0016887
Prci3g1592 1256 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 692 978 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci3g1592 1256 Pfam ABC transporter 374 520 IPR003439 GO:0005524
Prci3g1592 1256 ProSitePatterns ABC transporters family signature. 1153 1167 IPR017871 GO:0005524|GO:0016887
Prci3g1592 1256 Gene3D ABC transporter type 1, transmembrane domain 76 987 IPR036640 GO:0005524|GO:0016020
Prci3g1592 1256 Pfam ABC transporter 1032 1181 IPR003439 GO:0005524
Prci3g1592 1256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 353 589 IPR003439 GO:0005524
Prci3g1592 1256 MobiDBLite consensus disorder prediction 642 669 - -
Prci3g1592 1256 Gene3D - 351 604 IPR027417 -
Prci3g1592 1256 SUPERFAMILY ABC transporter transmembrane region 18 334 IPR036640 GO:0005524|GO:0016020
Prci3g1592 1256 FunFam ABC transporter B family member 1 1003 1253 - -
Prci3g1592 1256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1013 1250 IPR003439 GO:0005524
Prci3g1592 1256 SMART AAA_5 380 566 IPR003593 GO:0016887
Prci3g1592 1256 SMART AAA_5 1040 1234 IPR003593 GO:0016887
Prci3g1592 1256 MobiDBLite consensus disorder prediction 642 656 - -
Prci3g1592 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 342 591 IPR027417 -
Prci3g1592 1256 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 32 318 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci3g1592 1256 CDD ABC_6TM_Pgp_ABCB1_D1_like 31 314 - -
Prci3g1592 1256 PANTHER ABC TRANSPORTER B FAMILY 7 592 IPR039421 -
Prci3g1592 1256 CDD ABC_MTABC3_MDL1_MDL2 1013 1249 - -
Prci3g1592 1256 FunFam ABC transporter B family member 1 671 979 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1592 Prci-Chr3 26111025 26116986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1592 14 1252 Calmodulin-binding Proteins AT2G36910 45.251 0.0 1065