Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1580 ATGCCGGGGAACAATTATAACTCCGGTGCTACTCCTACTACACCCAGATCAAGATTAGAAAGGCTTCTGAGGGAAAGAGAGCTAAGAAAATCCAACAGGCATTCTCAACCAGTTGAGGAGACAAGAGACAGCAACAAAGAACTTGAACTTTATAGTGATGATTTGTCTTCCAGCGGGATTGACATTGGTGAGGAAGAATTACTTGAAAAGGTTGCAGCTGCAGGATTGTCAGATAAATTTCAGAGGCAAGATGAAGCGTCACCCAGACAACGCTTATTGGTGGTGGCCAACAGGTTACCTGTGTCTGCTACTAGAAGGGGTGTGGATTCATGGCAACTTGAGATCAGCGTAGGGGGACTAGTCAGTGCAATTTTAGGTGTAAAGGAGTTTGACACTACGTGGATTGGGTGGGCTGGTGTGAATGTGCCGGATGAAGTTGGCCAGAACACATTGACCAAAGCTTTAGCTGAAAAGAGATGCATCCCAGTATTTCTTGATGAGGAGATAGTTCATCAATATTACAATGGTTACTGCAACAACATCTTATGGCCTCTTTTTCATTACCTTAGGCTTCCACAAGAGGACCGACTTGCTACCACACGCACTTTACAATCTCAATTCGATGCTTACAAGATAGCAAACCAATTGTTTGCAGATGTTGTAAACAAGTATTACCAGGAAGGTGATGTCGTTTGGTGCCATGACTACCACCTAATGTTTCTTCCAAAATGTTTAAAAGAATATAACGAAAAAATGAAAGTTGGCTGGTTTCTCCACACACCATTTCCTTCCTCAGAAATACATAGGACACTGCCATCCCGATCTGAACTATTGAGATCTGTACTTTCTGCTGACTTGGTGGGGTTTCATACATATGATTATGCTAGGCATTTTGTTAGTGCTTGTACTCGAATTCTTGGACTTGAGGGTACACCTGAAGGAGTAGAAGATCATGGGAAGCTGATTCGTGTAGCTGCATTTCCCATCGGGATTAACCCTGAACGATTTATCCGAGCCCTTGAACTCCCTCAAGTCCAGGATCACATAATAGAACTGAAAGAACGATTTGCAGGCCGAAAGGTAATGCTAGGTGTTGATCGTCTTGATATGATAAAAGGAATCCCCCAGAAAATCTTGGCATTTGAGAAGTTCCTTGAGGAGAATCCTGACTGGCGTGATAAAGTGGTCTTGATACAAATTGCTGTTCCTACAAGAACTGATGTTCCTGAATACCAAAAGCTTACAAGTCAGGTGCATGAGATTGTTGGACGCATTAATGGAAGATTTGGAACACTTACTGCTGTTCCGATACATCACCTGGACCGTTCGCTTGACTTTCATGCATTATGTGCACTGTATGCTGTTACTGATGTAGCACTCGTCACATCTTTAAGGGATGGAATGAACCTTGTCAGCTACGAGTATGTTGCTTGCCAAGCTTCTAAGAATGGGGTTCTCATTCTTAGTGAGTTTGCAGGTGCAGCACAGTCTCTCGGTGCTGGTGCTGTCTTGGTAAATCCATGGAATATCACTGAGGTTGCTGCCTCTATTGCTTATGCCTTGAACATGCCTGCTGATGAAAGAGAGAAACGCCACCAGTTCAACTTCAAGCATGTGACCACTCACACATCTCAGGAGTGGGCTGCAACATTCGTGAGTGAACTGAATGACACCATTGTTGAAGCTCAGCTTAGGAGGAGACAAGTTCCACCCCCACTTCCCCATGAAGCTACAGTTGATCGTTACTCAAAATCCAATAATCGATTAATCATTCTGGGATTCAATGCCACTTTGACTGAACCAGTGGATGCCCTTGGGAGTGGCGGCCAAATTAGAGAACTGGAGCTTAAATTGCACCCAAATGTAAAAGATCCTTTAAAGAAGTTATCTGATGATCCGAAGACAACAGTAATTGTTCTTAGTGGGAGTGATCGAGGCGTCCTGGACAAAAACTTCAGCGAATACGACGTGTGGCTGGCAGCAGAAAATGGGATGTTTTTACGTCCTACTACTGGTGAATGGATGACAACCATGCCTGAAATGTTAAACATGGATTGGGTTGATAGTGTGAAGCAAGTTTTTGAGTACTTTACTGAAAGAACACCACGATCCCATTTTGAGCTGCGTGAGACTTCAATTGTATGGAATTACAAGTATGCAGATGTTGAGTTTGGAAGAATTCAAGCAAGAGATCTACTGCAGCATCTATGGACAGGCCCAATATCAAATGCATCAGTTGATGTTGTCCAAGGTGGTAGATCTGTTGAGGTTCGAGCGGTTGGTGTCTCAAAGGGAGCAGCAATTGATCGGATTCTGGGAGAGGTAGTTCATCATAAGGGCCTGGAGGCACCTATTGATTATGTTCTTTGCGTTGGACACTTTCTGCCAAAGGATGAAGATGTCTACTCATTTTTTGAGCCGGAGCTCCCCTCTGAATCACCGACAACAGCAAGAGCTATGCTATCCAACCCTTACAAGCCAGCAAAAAATTGGTCTAAGGCAGCTCGACTCAAGAAGCAACTCTCCATGTCAACTTTAGAAAAGAGAAAAATGGATCAAGCAATTGGGATTCCATTGCCGCAGACATATCATGATAGAGTATCACTGCGAGAGGGTTCGTCGGTGCTTGATCTTAAAGGTGATAATTACTTCTCTTGTGCTGTTGCGCGAAAGAGATCAAGCGCAAGATATATTCTTAAAACATCAGATGATGTTGTCCAACTCTTGAAGGACCTGGCGGATCGTGCATCATCAGTATCAACTTGA 2766 0.4367 MPGNNYNSGATPTTPRSRLERLLRERELRKSNRHSQPVEETRDSNKELELYSDDLSSSGIDIGEEELLEKVAAAGLSDKFQRQDEASPRQRLLVVANRLPVSATRRGVDSWQLEISVGGLVSAILGVKEFDTTWIGWAGVNVPDEVGQNTLTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLRLPQEDRLATTRTLQSQFDAYKIANQLFADVVNKYYQEGDVVWCHDYHLMFLPKCLKEYNEKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLSADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGKLIRVAAFPIGINPERFIRALELPQVQDHIIELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEYVACQASKNGVLILSEFAGAAQSLGAGAVLVNPWNITEVAASIAYALNMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRRRQVPPPLPHEATVDRYSKSNNRLIILGFNATLTEPVDALGSGGQIRELELKLHPNVKDPLKKLSDDPKTTVIVLSGSDRGVLDKNFSEYDVWLAAENGMFLRPTTGEWMTTMPEMLNMDWVDSVKQVFEYFTERTPRSHFELRETSIVWNYKYADVEFGRIQARDLLQHLWTGPISNASVDVVQGGRSVEVRAVGVSKGAAIDRILGEVVHHKGLEAPIDYVLCVGHFLPKDEDVYSFFEPELPSESPTTARAMLSNPYKPAKNWSKAARLKKQLSMSTLEKRKMDQAIGIPLPQTYHDRVSLREGSSVLDLKGDNYFSCAVARKRSSARYILKTSDDVVQLLKDLADRASSVST 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1580 921 CDD GT20_TPS 91 556 IPR001830 GO:0003824|GO:0005992
Prci3g1580 921 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 338 540 - -
Prci3g1580 921 Pfam Trehalose-phosphatase 616 809 IPR003337 GO:0003824|GO:0005992
Prci3g1580 921 Pfam Glycosyltransferase family 20 91 556 IPR001830 GO:0003824|GO:0005992
Prci3g1580 921 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 91 556 IPR012766 GO:0003825|GO:0005992
Prci3g1580 921 CDD HAD_TPP 589 824 - -
Prci3g1580 921 Gene3D Glycogen Phosphorylase B; 82 337 - -
Prci3g1580 921 FunFam Alpha,alpha-trehalose-phosphate synthase 614 686 - -
Prci3g1580 921 SUPERFAMILY HAD-like 589 907 IPR036412 -
Prci3g1580 921 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 83 337 - -
Prci3g1580 921 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 90 559 - -
Prci3g1580 921 Gene3D - 616 774 IPR023214 -
Prci3g1580 921 Gene3D - 680 760 - -
Prci3g1580 921 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 83 913 IPR001830 GO:0003824|GO:0005992
Prci3g1580 921 Gene3D Glycogen Phosphorylase B; 338 540 - -
Prci3g1580 921 MobiDBLite consensus disorder prediction 27 50 - -
Prci3g1580 921 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 680 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1580 Prci-Chr3 25700573 25709347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1580 1 918 Trehalose Biosynthesis Gene Families AT1G78580 72.670 0.0 1377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1580 K16055 - qsa:O6P43_012860 1479.15