Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1564 ATGGAATCGAAAATCCCAGCCAGGTTTACACTGGGGAAGCAGTCATCGATGGCCCCGGAAAGGCATAGCGGCGAATCCGAGCTGCATCAAGAGGGCGACGGCCTGGGAGGTATTGATCCGGGATTTAGGCTGATGTGTTTGGCCAATGAAGGCGATCTGGATGGTATTCGTGAGCTATTAAATACGGGGGTTACTGTGAATTACAGAGATATTGACAATCGCACTCCTCTTCATGTGGCGGCCTGTCAGGGATTGACTGATGTGGTTGCTCTGTTGCTCGAAAAAGGGGCTGTGGTTGACCCACAAGATCGCTGGGGGAGTACGCCTCTTGCAGATGCTATACATTATAAAAACAACGATGTGATCAAATTATTGGAGAAGCATGGAGCAAAGTCTCTGATGGCCCCTATGCATGTTAACCATGCACGGGAAGTACCGGAATATGAAATTGATCCTAAGGAGCTTGATTTTACCAACAGCGTGGAGATAACTAAGGGAACTTTCTGTAGCGCTTTGTGGCGTGGAACAGAGGTTGCTGTGAAAAAGCTTGGGGATGATGTCATTACTAATGAGGAGAAAGTGAAGGCCTTTAGAGATGAGCTTGCATTGTTTCAGAAGATTCGGCATCCTAATGTAGTTCAGTTTCTGGGTGCTGTGACTCAGAGCAGCCCAATGATGATTGTTATAGAATATCTTCCCAAGGGAGATCTTCGTGCATTCTTGAAAAGAAAAGGAGCTTTGAGACCAACAACAGCAGTGCGATTTGCTCTTGATATTGCCAGGGGAATGAACTATCTGCATGAAAATAAGCCATCACCAATAATTCATCGTGATCTTGAGCCATCTAATATATTGCGGGATGATTCGGGCCACCTAAAAGTTGCAGACCTTGGGGTCAGCAAATTGCTGTCAGTCAAAGAAGAGAGACCTTTAACCTGCCAAGAGACTTCTTGCCGCTATGTGGCTCCAGAGGTTTTTAATCAAGAAGAGTATGACACCAAGGTGGATGTATTCTCATTTGCTTTAATTTTGCAAGAGATGATAGAGGGCTGTCCCCCATTTTTTACGAAGCAAGAAGATCAGGTTCCTAAGGTATATGCTGCAAAAGAGCGTCCTCCTTTCAGAGCTCCAACCAAGCGTTATGCCCATGGACTGAGAGAATTGATTGAAGAGTGCTGGAATGAGAATCCAGCAAAGAGGCCAACGTTTAGGCAAATAATAACAAGGCTTGAATCCATGTACAACACACTTACTCATAAAAGACGATGGAAGGTTAGGCCACTGAAATGCTTCCAGAATCTGGAAGCCATGTTGAAGAGAGACCACTCAAATCTAAGCAGTCCTGGCGGTTCATCTCGTTCTACAGCCAGCAGTTTATGA 1380 0.4543 MESKIPARFTLGKQSSMAPERHSGESELHQEGDGLGGIDPGFRLMCLANEGDLDGIRELLNTGVTVNYRDIDNRTPLHVAACQGLTDVVALLLEKGAVVDPQDRWGSTPLADAIHYKNNDVIKLLEKHGAKSLMAPMHVNHAREVPEYEIDPKELDFTNSVEITKGTFCSALWRGTEVAVKKLGDDVITNEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVIEYLPKGDLRAFLKRKGALRPTTAVRFALDIARGMNYLHENKPSPIIHRDLEPSNILRDDSGHLKVADLGVSKLLSVKEERPLTCQETSCRYVAPEVFNQEEYDTKVDVFSFALILQEMIEGCPPFFTKQEDQVPKVYAAKERPPFRAPTKRYAHGLRELIEECWNENPAKRPTFRQIITRLESMYNTLTHKRRWKVRPLKCFQNLEAMLKRDHSNLSSPGGSSRSTASSL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1564 459 ProSiteProfiles Protein kinase domain profile. 122 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1564 459 MobiDBLite consensus disorder prediction 1 33 - -
Prci3g1564 459 FunFam Integrin-linked protein kinase family 22 148 - -
Prci3g1564 459 Pfam Protein tyrosine and serine/threonine kinase 173 410 IPR001245 GO:0004672|GO:0006468
Prci3g1564 459 SUPERFAMILY Ankyrin repeat 44 132 IPR036770 -
Prci3g1564 459 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 148 413 - -
Prci3g1564 459 Pfam Ankyrin repeats (3 copies) 44 130 IPR002110 GO:0005515
Prci3g1564 459 PIRSF ILK 2 433 - -
Prci3g1564 459 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
Prci3g1564 459 Gene3D - 15 148 IPR036770 -
Prci3g1564 459 Gene3D Transferase(Phosphotransferase) domain 1 233 447 - -
Prci3g1564 459 CDD STKc_MAP3K-like 163 410 - -
Prci3g1564 459 SMART ANK_2a 105 135 IPR002110 GO:0005515
Prci3g1564 459 SMART ANK_2a 36 68 IPR002110 GO:0005515
Prci3g1564 459 SMART ANK_2a 72 101 IPR002110 GO:0005515
Prci3g1564 459 SUPERFAMILY Protein kinase-like (PK-like) 162 411 IPR011009 -
Prci3g1564 459 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
Prci3g1564 459 Gene3D Phosphorylase Kinase; domain 1 149 232 - -
Prci3g1564 459 FunFam Os01g0748600 protein 143 430 - -
Prci3g1564 459 FunFam serine/threonine-protein kinase STY46-like 150 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1564 Prci-Chr3 25545196 25553327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1564 8 431 MAP Kinase Kinase Kinase AT4G18950 68.150 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Prci3g1564 PK_Tyr_Ser-Thr 1.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1564 - - gmx:100790126 771.541