Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1557 ATGGGGGCTACCTATTGGAAGTTTAATGATTCCTGTGGAATTGATATGGTTGGAGTAACAGCGGAACTCTCTCCTGAATCAGAGAGAAGACTAGATTGTGACTGCAGATTTGAAAACAACACAGTCTGCCATGTTGTAAAGATGACTCTCAAGCGCCTTAGCCTCCCTGGCATGCTCCCACCTCAACTGGTCAAGCTGCCCTATCTTCGAGAAATAGATTTTGCTTACAATCTCTTTACTGGTTCAATTCCAAAGGAATGGGCTTTAATGAATTTAACTTCAATCTCTCTTCTTGTGAACCGCTTATCTGGGGAAATTCCCAATCATCTAGGAAATATTACTTCTCTCACATACCTGATGCTTGAAGCAAACCAATTTTCTGGTGTCATTCCTCCTGATCTTGGGAGTCTAATCAACTTGCAAACGTTGGTACTGTCATCCAATAAATTGACTGGGAGCTTACCAGGGGAACTTGCTGGGTTACAGAATTTGACTGACTTTAGGATAAATGATAACAACTTCAATGGAACCATACCTAACTTTATACAAAACTGGAAGCTTCTCCGAAGATTAGAAATGCATGCAAGTGGACTGGAGGGACCAATCCCATCAAATATATCACTTTTGGAGAACTTAGCTCAGTTGAGAATCAGTGACATAAATAGTCCTAGTCAAGGTTTTCCTTTGCTGGAAAACATGCCAAAAATGGAAACATTAGTTTTGAGGAACTGTAACCTTACTGGGGAGATACCTTTATACATCTGGACGATGACGAATTTGGCAACATTGGATCTCAGCTTTAATAAGATAGTTGGGCACATTCCACCAGTTATAAATACCAGACGTCTGAGATATATGTACCTTACAGGAAATATGCTAAGTGGAAATGTACCAAAATTCTTGAAGGGTGGAAGTAGCATCGATCTTTCATACAACAACTTTACTTGGCAAGGTCATGAGCAACCTGCTTGTCAGAATAACAGGAACTTGGATCTGAATTTGTTTAGAAGCTTTAGAAGGAAGAACAAGTTAGAAGAATATGTCCCTTGCTTAGAGAACTTCAGTTGTCAACAGTATTCAACCTGTTTACACATAAATAGTGGTGGGATAAATGTAAAGGTGACAGAAAATAAGGGAGAAACCCTTTATTTAGGGGATGGAAATGTTGGTGGTGGTGCAGCAACATATCACTATAGCAACACTTATAATTGGGGGTTCAGTAGTACTGGAGACTTCATGGATGATTTTAACTCCCAGAACATAAGATACATCGTATCTCTGCCATCTTCAAATATGCCTAAACTATATACAACCGCTCGTATTTCTCCACTTTCACTTACTTATTTCCATAATTGCATGGAAAATGGGAACTACACTGTAAATCTCCACTTTTCTGAAATACAGTTCACAAATGATAATACATACACAAGTCTTGGGAAGCGCATATTCGATATCTATGTTCAGGAACAATTAATTTGGAAGGATTTTAATATTGAGAGTAAGACAACTGTTGCTCGAAAACCACTGATACAGCCAATACATAATGTCAGTGTCACAAATAATGTTTTGGAGATTCGGTTCCAATGGGCTGGAAAAGGAACAACTAGAATTCCTGATATCGGAGTTTATGGTCCCATTGTGTCAGCATTATCTGTGGTTTCTGATTCCAGACCTTGCTCAAATGGTGGAAAGAAGGGTGCGGTTAATAAGTTCATTGCAATTGGAATTTCTGCTCTATTCTTAATGCTTTTTATGGCAGGGATCATTTGGTGGAAAGGCTGTTTCAGAGAAAAACTCCAAAAGACAGAAGATATTCAGACAGGAACTTTCAGCTTCAAACTAATGAGAGCGGCCACTGATGACTTCTCTTATGATAACAAAATTGGGGAAGGCGGATTTGGTCCTGTATACAAGGGTCAGTTACCTGATGGTACTGTTATAGCGGTCAAGCAACTATCATCAATGTCACGGCAGGGAAATCGTGAATTTCTAAATGAAATAGGCATAATATCTTGTCTGCAACATCCTAACCTTGTGAAACTCTATGGATCTTGCATTGAAGGGGATCAGCTGCTATTGGTATATGAGTACATGGAAAATAATAACCTCGCCCGAGCTCTATTTGGCAATGAGAACAATCGGATTCAACTGGATTGGCCCACAAGAGTTAGGATCTGTATTGGCATTGCAAAAGGTCTTGCATTCCTTCACGAAGAGTCAAGGCTCCAGATTGTGCACAGAGATATCAAGGCTACTAATGTGTTACTTGATGGCAATTTAAATCCTAAAATATCAGATTTTGGTTTGGCCAAGCTCAACGACACAGAGAAGACACACATCACCACTCGAATTGCAGGAACTATAGGATATATGGCTCCAGAATATGCATTATGGGGCCATCTAACATTCAAGGCAGATGTTTACAGTTTTGGTGTCTTGGCCTTAGAAATTGTCACAGGGAAGAGCAATAACAATTATGTGCCAGATAATGGCGCTGTTTGTCTTCTAGATTGGGCATGTCGATTGGAGCAAAGTGGGAAGTTGATGGAGCTGGTTGATGAAAGAATGGGGTCAAACGTTAATGAAAGGGAAGCAGAAGAAGTGCTCAAAGTTGCTCTTCTTTGCACAAATGCATCACCATCACTAAGACCCACAATGTCTGAGGTTGTAAGTATGCTTGAAGGACAAATGGATATTCCAGATGTAGTTCCAGAACCAGGTGCATGCAATGAAGACTTGAGGTTCAAAGCCTTGAGAGATCTTGACCAATGGTCACGGCGGAGTTTGAATGGAAACCAGACCCAATCTTCAGTGTCAGTCCATACCTTCAGCTTAGAAATTGGCAATACTAATACGGCTTGTTCTGTGGACTGTGTGGATCATCAGTTAGTCCACAGAACTGAGATTTCACCTTCAAAGGCAAGTTCAACACCCTGA 2937 0.4028 MGATYWKFNDSCGIDMVGVTAELSPESERRLDCDCRFENNTVCHVVKMTLKRLSLPGMLPPQLVKLPYLREIDFAYNLFTGSIPKEWALMNLTSISLLVNRLSGEIPNHLGNITSLTYLMLEANQFSGVIPPDLGSLINLQTLVLSSNKLTGSLPGELAGLQNLTDFRINDNNFNGTIPNFIQNWKLLRRLEMHASGLEGPIPSNISLLENLAQLRISDINSPSQGFPLLENMPKMETLVLRNCNLTGEIPLYIWTMTNLATLDLSFNKIVGHIPPVINTRRLRYMYLTGNMLSGNVPKFLKGGSSIDLSYNNFTWQGHEQPACQNNRNLDLNLFRSFRRKNKLEEYVPCLENFSCQQYSTCLHINSGGINVKVTENKGETLYLGDGNVGGGAATYHYSNTYNWGFSSTGDFMDDFNSQNIRYIVSLPSSNMPKLYTTARISPLSLTYFHNCMENGNYTVNLHFSEIQFTNDNTYTSLGKRIFDIYVQEQLIWKDFNIESKTTVARKPLIQPIHNVSVTNNVLEIRFQWAGKGTTRIPDIGVYGPIVSALSVVSDSRPCSNGGKKGAVNKFIAIGISALFLMLFMAGIIWWKGCFREKLQKTEDIQTGTFSFKLMRAATDDFSYDNKIGEGGFGPVYKGQLPDGTVIAVKQLSSMSRQGNREFLNEIGIISCLQHPNLVKLYGSCIEGDQLLLVYEYMENNNLARALFGNENNRIQLDWPTRVRICIGIAKGLAFLHEESRLQIVHRDIKATNVLLDGNLNPKISDFGLAKLNDTEKTHITTRIAGTIGYMAPEYALWGHLTFKADVYSFGVLALEIVTGKSNNNYVPDNGAVCLLDWACRLEQSGKLMELVDERMGSNVNEREAEEVLKVALLCTNASPSLRPTMSEVVSMLEGQMDIPDVVPEPGACNEDLRFKALRDLDQWSRRSLNGNQTQSSVSVHTFSLEIGNTNTACSVDCVDHQLVHRTEISPSKASSTP 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1557 978 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 593 697 - -
Prci3g1557 978 CDD STKc_IRAK 628 895 - -
Prci3g1557 978 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 360 555 - -
Prci3g1557 978 SUPERFAMILY Protein kinase-like (PK-like) 605 896 IPR011009 -
Prci3g1557 978 Gene3D - 358 557 - -
Prci3g1557 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Prci3g1557 978 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 1 154 - -
Prci3g1557 978 FunFam Putative LRR receptor-like serine/threonine-protein kinase 698 905 - -
Prci3g1557 978 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Prci3g1557 978 Gene3D Ribonuclease Inhibitor 6 153 IPR032675 -
Prci3g1557 978 Gene3D Ribonuclease Inhibitor 154 222 IPR032675 -
Prci3g1557 978 Gene3D Ribonuclease Inhibitor 223 337 IPR032675 -
Prci3g1557 978 Pfam Protein tyrosine and serine/threonine kinase 624 893 IPR001245 GO:0004672|GO:0006468
Prci3g1557 978 Gene3D Phosphorylase Kinase; domain 1 593 697 - -
Prci3g1557 978 SMART serkin_6 622 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1557 978 SUPERFAMILY L domain-like 41 315 - -
Prci3g1557 978 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 155 221 - -
Prci3g1557 978 ProSiteProfiles Protein kinase domain profile. 622 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1557 978 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 223 343 - -
Prci3g1557 978 Pfam Malectin domain 362 550 IPR021720 -
Prci3g1557 978 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 6 925 - -
Prci3g1557 978 Gene3D Transferase(Phosphotransferase) domain 1 698 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1557 Prci-Chr3 25457945 25471901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1557 1 788 Receptor kinase-like Gene Family AT1G29750 58.491 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci3g1557 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1557 - - qsa:O6P43_032037 1381.31