Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1556 ATGCAGGTTTTTAACTTCTTTGAGCTATTACTTCTGGCATTAACTTGCTTCCAGTTGCTGGGAATTTCTCATGAGTCTAGATTACCTCAAGATGAAGCGGAACTCTCTCCTGAATCAGAGAGAAGACTAGATTGTGACTGCAGATTTGAAAACAACACAGTCTGCCATGTTGTAAAGATGACTCTCAAGCGCCTTAGCCTCCCTGGCATGCTCCCACCTCAACTGGTCAAGCTGCCCTATCTTCGAGAAATAGATTTTGCTTACAATCTCTTTACTGGTTCAATTCCAAAGGAATGGGCTTTAATGAATTTAACTTCAATCTCTCTTCTTGTGAACCGCTTATCTGGGGAAATTCCCAATCATCTAGGAAATATTACTTCTCTCACATACCTGATGCTTGAAGCAAACCAATTTTCTGGTGTCATTCCTCCTGATCTTGGGAGTCTAATCAACTTGCAAACGTTGGTACTGTCATCCAATAAATTGACTGGGAGCTTACCAGGGGAACTTGCTGGGTTACAGAATTTGACTGACTTTAGGATAAATGATAACAACTTCAATGGAACCATACCTAACTTTATACAAAACTGGAAGCTTCTCCGAAGATTAGAAATGCATGCAAGTGGACTGGAGGGACCAATCCCATCAAATATATCACTTTTGGAGAACTTAGCTCAGTTGAGAATCAGTGACATAAATAGTCCTAGTCAAGGTTTTCCTTTGCTGGAAAACATGCCAAAAATGGAAACATTAGTTTTGAGGAACTGTAACCTTACTGGGGAGATACCTTTATACATCTGGACGATGACGAATTTGGCAACATTGGATCTCAGCTTTAATAAGATAGTTGGGCACATTCCACCAGTTATAAATACCAGACGTCTGAGATATATGTACCTTACAGGAAATATGCTAAGTGGAAATGTACCAAAATTCTTGAAGGGTGGAAGTAGCATCGATCTTTCATACAACAACTTTACTTGGCAAGGTCATGAGCAACCTGCTTGTCAGAATAACAGGAACTTGGATCTGAATTTGTTTAGAAGCTTTAGAAGGAAGAACAAGTTAGAAGAATATGTCCCTTGCTTAGAGAACTTCAGTTGTCAACAGTATTCAACCTGTTTACACATAAATAGTGGTGGGATAAATGTAAAGGTGACAGAAAATAAGGGAGAAACCCTTTATTTAGGGGATGGAAATGTTGGTGGTGGTGCAGCAACATATCACTATAGCAACACTTATAATTGGGGGTTCAGTAGTACTGGAGACTTCATGGATGATTTTAACTCCCAGAACATAAGATACATCGTATCTCTGCCATCTTCAAATATGCCTAAACTATATACAACCGCTCGTATTTCTCCACTTTCACTTACTTATTTCCATAATTGCATGGAAAATGGGAACTACACTGTAAATCTCCACTTTTCTGAAATACAGTTCACAAATGATAATACATACACAAGTCTTGGGAAGCGCATATTCGATATCTATGTTCAGGAACAATTAATTTGGAAGGATTTTAATATTGAGAGTAAGACAACTGTTGCTCGAAAACCACTGATACAGCCAATACATAATGTCAGTGTCACAAATAATGTTTTGGAGATTCGGTTCCAATGGGCTGGAAAAGGAACAACTAGAATTCCTGATATCGGAGTTTATGGTCCCATTGTGTCAGCATTATCTGTGGTTTCTGATTCCAGACCTTGCTCAAATGGTGGAAAGAAGGGTGCGGTTAATAAGTTCATTGCAATTGGAATTTCTGCTCTATTCTTAATGCTTTTTATGGCAGGGATCATTTGGTGGAAAGGCTGTTTCAGAGAAAAACTCCAAAAGACAGAAGATATTCAGACAGGAACTTTCAGCTTCAAACTAATGAGAGCGGCCACTGATGACTTCTCTTATGATAACAAAATTGGGGAAGGCGGATTTGGTCCTGTATACAAGGGTCAGTTACCTGATGGTACTGTTATAGCGGTCAAGCAACTATCATCAATGTCACGGCAGGGAAATCGTGAATTTCTAAATGAAATAGGCATAATATCTTGTCTGCAACATCCTAACCTTGTGAAACTCTATGGATCTTGCATTGAAGGGGATCAGCTGCTATTGGTATATGAGTACATGGAAAATAATAACCTCGCCCGAGCTCTATTTGGCAATGAGAACAATCGGATTCAACTGGATTGGCCCACAAGAGTTAGGATCTGTATTGGCATTGCAAAAGGTCTTGCATTCCTTCACGAAGAGTCAAGGCTCCAGATTGTGCACAGAGATATCAAGGCTACTAATGTGTTACTTGATGGCAATTTAAATCCTAAAATATCAGATTTTGGTTTGGCCAAGCTCAACGACACAGAGAAGACACACATCACCACTCGAATTGCAGGAACTATAGGATATATGGCTCCAGAATATGCATTATGGGGCCATCTAACATTCAAGGCAGATGTTTACAGTTTTGGTGTCTTGGCCTTAGAAATTGTCACAGGGAAGAGCAATAACAATTATGTGCCAGATAATGGCGCTGTTTGTCTTCTAGATTGGGCATGTCGATTGGAGCAAAGTGGGAAGTTGATGGAGCTGGTTGATGAAAGAATGGGGTCAAACGTTAATGAAAGGGAAGCAGAAGAAGTGCTCAAAGTTGCTCTTCTTTGCACAAATGCATCACCATCACTAAGACCCACAATGTCTGAGGTTGTAAGTATGCTTGAAGGACAAATGGATATTCCAGATGTAGTTCCAGAACCAGGTGCATGCAATGAAGACTTGAGGTTCAAAGCCTTGAGAGATCTTGACCAATGGTCACGGCGGAGTTTGAATGGAAACCAGACCCAATCTTCAGTGTCAGTCCATACCTTCAGCTTAGAAATTGGCAATACTAATACGGCTTGTTCTGTGGACTGTGTGGATCATCAGTTAGTCCACAGAACTGAGATTTCACCTTCAAAGGCAAGTTCAACACCCTGA 2973 0.402 MQVFNFFELLLLALTCFQLLGISHESRLPQDEAELSPESERRLDCDCRFENNTVCHVVKMTLKRLSLPGMLPPQLVKLPYLREIDFAYNLFTGSIPKEWALMNLTSISLLVNRLSGEIPNHLGNITSLTYLMLEANQFSGVIPPDLGSLINLQTLVLSSNKLTGSLPGELAGLQNLTDFRINDNNFNGTIPNFIQNWKLLRRLEMHASGLEGPIPSNISLLENLAQLRISDINSPSQGFPLLENMPKMETLVLRNCNLTGEIPLYIWTMTNLATLDLSFNKIVGHIPPVINTRRLRYMYLTGNMLSGNVPKFLKGGSSIDLSYNNFTWQGHEQPACQNNRNLDLNLFRSFRRKNKLEEYVPCLENFSCQQYSTCLHINSGGINVKVTENKGETLYLGDGNVGGGAATYHYSNTYNWGFSSTGDFMDDFNSQNIRYIVSLPSSNMPKLYTTARISPLSLTYFHNCMENGNYTVNLHFSEIQFTNDNTYTSLGKRIFDIYVQEQLIWKDFNIESKTTVARKPLIQPIHNVSVTNNVLEIRFQWAGKGTTRIPDIGVYGPIVSALSVVSDSRPCSNGGKKGAVNKFIAIGISALFLMLFMAGIIWWKGCFREKLQKTEDIQTGTFSFKLMRAATDDFSYDNKIGEGGFGPVYKGQLPDGTVIAVKQLSSMSRQGNREFLNEIGIISCLQHPNLVKLYGSCIEGDQLLLVYEYMENNNLARALFGNENNRIQLDWPTRVRICIGIAKGLAFLHEESRLQIVHRDIKATNVLLDGNLNPKISDFGLAKLNDTEKTHITTRIAGTIGYMAPEYALWGHLTFKADVYSFGVLALEIVTGKSNNNYVPDNGAVCLLDWACRLEQSGKLMELVDERMGSNVNEREAEEVLKVALLCTNASPSLRPTMSEVVSMLEGQMDIPDVVPEPGACNEDLRFKALRDLDQWSRRSLNGNQTQSSVSVHTFSLEIGNTNTACSVDCVDHQLVHRTEISPSKASSTP 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1556 990 SUPERFAMILY L domain-like 53 327 - -
Prci3g1556 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 756 768 IPR008271 GO:0004672|GO:0006468
Prci3g1556 990 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 167 233 - -
Prci3g1556 990 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 23 166 - -
Prci3g1556 990 Gene3D Phosphorylase Kinase; domain 1 605 709 - -
Prci3g1556 990 CDD STKc_IRAK 640 907 - -
Prci3g1556 990 Pfam Malectin domain 374 562 IPR021720 -
Prci3g1556 990 Gene3D Ribonuclease Inhibitor 166 238 IPR032675 -
Prci3g1556 990 Gene3D Ribonuclease Inhibitor 25 165 IPR032675 -
Prci3g1556 990 ProSiteProfiles Protein kinase domain profile. 634 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1556 990 Gene3D - 370 569 - -
Prci3g1556 990 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 235 355 - -
Prci3g1556 990 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 605 709 - -
Prci3g1556 990 SUPERFAMILY Protein kinase-like (PK-like) 617 908 IPR011009 -
Prci3g1556 990 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Prci3g1556 990 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 36 937 - -
Prci3g1556 990 Pfam Protein tyrosine and serine/threonine kinase 636 905 IPR001245 GO:0004672|GO:0006468
Prci3g1556 990 Gene3D Transferase(Phosphotransferase) domain 1 710 913 - -
Prci3g1556 990 FunFam Putative LRR receptor-like serine/threonine-protein kinase 710 917 - -
Prci3g1556 990 SMART serkin_6 634 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1556 990 Gene3D Ribonuclease Inhibitor 239 349 IPR032675 -
Prci3g1556 990 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 372 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1556 Prci-Chr3 25457944 25471901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1556 4 800 Receptor kinase-like Gene Family AT1G29750 55.635 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci3g1556 PK_Tyr_Ser-Thr 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1556 - - qsa:O6P43_032037 1355.5