Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1555 ATGCAGGTTTTTAACTTCTTTGAGCTATTACTTCTGGCATTAACTTGCTTCCAGTTGCTGGGAATTTCTCATGAGTCTAGATTACCTCAAGATGAAGTTGACGCACTTCATGAAATTACAAGAACAATGGGGGCTACCTATTGGAAGTTTAATGATTCCTGTGGAATTGATATGGTTGGAGTAACAGCGGAACTCTCTCCTGAATCAGAGAGAAGACTAGATTGTGACTGCAGATTTGAAAACAACACAGTCTGCCATGTTGTAAAGATGACTCTCAAGCGCCTTAGCCTCCCTGGCATGCTCCCACCTCAACTGGTCAAGCTGCCCTATCTTCGAGAAATAGATTTTGCTTACAATCTCTTTACTGGTTCAATTCCAAAGGAATGGGCTTTAATGAATTTAACTTCAATCTCTCTTCTTGTGAACCGCTTATCTGGGGAAATTCCCAATCATCTAGGAAATATTACTTCTCTCACATACCTGATGCTTGAAGCAAACCAATTTTCTGGTGTCATTCCTCCTGATCTTGGGAGTCTAATCAACTTGCAAACGTTGGTACTGTCATCCAATAAATTGACTGGGAGCTTACCAGGGGAACTTGCTGGGTTACAGAATTTGACTGACTTTAGGATAAATGATAACAACTTCAATGGAACCATACCTAACTTTATACAAAACTGGAAGCTTCTCCGAAGATTAGAAATGCATGCAAGTGGACTGGAGGGACCAATCCCATCAAATATATCACTTTTGGAGAACTTAGCTCAGTTGAGAATCAGTGACATAAATAGTCCTAGTCAAGGTTTTCCTTTGCTGGAAAACATGCCAAAAATGGAAACATTAGTTTTGAGGAACTGTAACCTTACTGGGGAGATACCTTTATACATCTGGACGATGACGAATTTGGCAACATTGGATCTCAGCTTTAATAAGATAGTTGGGCACATTCCACCAGTTATAAATACCAGACGTCTGAGATATATGTACCTTACAGGAAATATGCTAAGTGGAAATGTACCAAAATTCTTGAAGGGTGGAAGTAGCATCGATCTTTCATACAACAACTTTACTTGGCAAGGTCATGAGCAACCTGCTTGTCAGAATAACAGGAACTTGGATCTGAATTTGTTTAGAAGCTTTAGAAGGAAGAACAAGTTAGAAGAATATGTCCCTTGCTTAGAGAACTTCAGTTGTCAACAGTATTCAACCTGTTTACACATAAATAGTGGTGGGATAAATGTAAAGGTGACAGAAAATAAGGGAGAAACCCTTTATTTAGGGGATGGAAATGTTGGTGGTGGTGCAGCAACATATCACTATAGCAACACTTATAATTGGGGGTTCAGTAGTACTGGAGACTTCATGGATGATTTTAACTCCCAGAACATAAGATACATCGTATCTCTGCCATCTTCAAATATGCCTAAACTATATACAACCGCTCGTATTTCTCCACTTTCACTTACTTATTTCCATAATTGCATGGAAAATGGGAACTACACTGTAAATCTCCACTTTTCTGAAATACAGTTCACAAATGATAATACATACACAAGTCTTGGGAAGCGCATATTCGATATCTATGTTCAGGAACAATTAATTTGGAAGGATTTTAATATTGAGAGTAAGACAACTGTTGCTCGAAAACCACTGATACAGCCAATACATAATGTCAGTGTCACAAATAATGTTTTGGAGATTCGGTTCCAATGGGCTGGAAAAGGAACAACTAGAATTCCTGATATCGGAGTTTATGGTCCCATTGTGTCAGCATTATCTGTGGTTTCTGATTCCAGACCTTGCTCAAATGGTGGAAAGAAGGGTGCGGTTAATAAGTTCATTGCAATTGGAATTTCTGCTCTATTCTTAATGCTTTTTATGGCAGGGATCATTTGGTGGAAAGGCTGTTTCAGAGAAAAACTCCAAAAGACAGAAGATATTCAGACAGGAACTTTCAGCTTCAAACTAATGAGAGCGGCCACTGATGACTTCTCTTATGATAACAAAATTGGGGAAGGCGGATTTGGTCCTGTATACAAGGGTCAGTTACCTGATGGTACTGTTATAGCGGTCAAGCAACTATCATCAATGTCACGGCAGGGAAATCGTGAATTTCTAAATGAAATAGGCATAATATCTTGTCTGCAACATCCTAACCTTGTGAAACTCTATGGATCTTGCATTGAAGGGGATCAGCTGCTATTGGTATATGAGTACATGGAAAATAATAACCTCGCCCGAGCTCTATTTGGCAATGAGAACAATCGGATTCAACTGGATTGGCCCACAAGAGTTAGGATCTGTATTGGCATTGCAAAAGGTCTTGCATTCCTTCACGAAGAGTCAAGGCTCCAGATTGTGCACAGAGATATCAAGGCTACTAATGTGTTACTTGATGGCAATTTAAATCCTAAAATATCAGATTTTGGTTTGGCCAAGCTCAACGACACAGAGAAGACACACATCACCACTCGAATTGCAGGAACTATAGGATATATGGCTCCAGAATATGCATTATGGGGCCATCTAACATTCAAGGCAGATGTTTACAGTTTTGGTGTCTTGGCCTTAGAAATTGTCACAGGGAAGAGCAATAACAATTATGTGCCAGATAATGGCGCTGTTTGTCTTCTAGATTGGGCATGTCGATTGGAGCAAAGTGGGAAGTTGATGGAGCTGGTTGATGAAAGAATGGGGTCAAACGTTAATGAAAGGGAAGCAGAAGAAGTGCTCAAAGTTGCTCTTCTTTGCACAAATGCATCACCATCACTAAGACCCACAATGTCTGAGGTTGTAAGTATGCTTGAAGGACAAATGGATATTCCAGATGTAGTTCCAGAACCAGGTGCATGCAATGAAGACTTGAGGTTCAAAGCCTTGAGAGATCTTGACCAATGGTCACGGCGGAGTTTGAATGGAAACCAGACCCAATCTTCAGTGTCAGTCCATACCTTCAGCTTAGAAATTGGCAATACTAATACGGCTTGTTCTGTGGACTGTGTGGATCATCAGTTAGTCCACAGAACTGAGATTTCACCTTCAAAGGCAAGTTCAACACCCTGA 3063 0.4016 MQVFNFFELLLLALTCFQLLGISHESRLPQDEVDALHEITRTMGATYWKFNDSCGIDMVGVTAELSPESERRLDCDCRFENNTVCHVVKMTLKRLSLPGMLPPQLVKLPYLREIDFAYNLFTGSIPKEWALMNLTSISLLVNRLSGEIPNHLGNITSLTYLMLEANQFSGVIPPDLGSLINLQTLVLSSNKLTGSLPGELAGLQNLTDFRINDNNFNGTIPNFIQNWKLLRRLEMHASGLEGPIPSNISLLENLAQLRISDINSPSQGFPLLENMPKMETLVLRNCNLTGEIPLYIWTMTNLATLDLSFNKIVGHIPPVINTRRLRYMYLTGNMLSGNVPKFLKGGSSIDLSYNNFTWQGHEQPACQNNRNLDLNLFRSFRRKNKLEEYVPCLENFSCQQYSTCLHINSGGINVKVTENKGETLYLGDGNVGGGAATYHYSNTYNWGFSSTGDFMDDFNSQNIRYIVSLPSSNMPKLYTTARISPLSLTYFHNCMENGNYTVNLHFSEIQFTNDNTYTSLGKRIFDIYVQEQLIWKDFNIESKTTVARKPLIQPIHNVSVTNNVLEIRFQWAGKGTTRIPDIGVYGPIVSALSVVSDSRPCSNGGKKGAVNKFIAIGISALFLMLFMAGIIWWKGCFREKLQKTEDIQTGTFSFKLMRAATDDFSYDNKIGEGGFGPVYKGQLPDGTVIAVKQLSSMSRQGNREFLNEIGIISCLQHPNLVKLYGSCIEGDQLLLVYEYMENNNLARALFGNENNRIQLDWPTRVRICIGIAKGLAFLHEESRLQIVHRDIKATNVLLDGNLNPKISDFGLAKLNDTEKTHITTRIAGTIGYMAPEYALWGHLTFKADVYSFGVLALEIVTGKSNNNYVPDNGAVCLLDWACRLEQSGKLMELVDERMGSNVNEREAEEVLKVALLCTNASPSLRPTMSEVVSMLEGQMDIPDVVPEPGACNEDLRFKALRDLDQWSRRSLNGNQTQSSVSVHTFSLEIGNTNTACSVDCVDHQLVHRTEISPSKASSTP 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1555 1020 Gene3D Transferase(Phosphotransferase) domain 1 740 943 - -
Prci3g1555 1020 ProSiteProfiles Protein kinase domain profile. 664 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1555 1020 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 263 - -
Prci3g1555 1020 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 739 - -
Prci3g1555 1020 Gene3D Ribonuclease Inhibitor 268 379 IPR032675 -
Prci3g1555 1020 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Prci3g1555 1020 Gene3D - 400 599 - -
Prci3g1555 1020 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 967 - -
Prci3g1555 1020 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 402 597 - -
Prci3g1555 1020 Pfam Protein tyrosine and serine/threonine kinase 666 935 IPR001245 GO:0004672|GO:0006468
Prci3g1555 1020 Gene3D Phosphorylase Kinase; domain 1 635 739 - -
Prci3g1555 1020 Pfam Malectin domain 404 592 IPR021720 -
Prci3g1555 1020 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 196 - -
Prci3g1555 1020 SMART serkin_6 664 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1555 1020 SUPERFAMILY L domain-like 83 357 - -
Prci3g1555 1020 Gene3D Ribonuclease Inhibitor 35 196 IPR032675 -
Prci3g1555 1020 Gene3D Ribonuclease Inhibitor 197 267 IPR032675 -
Prci3g1555 1020 CDD STKc_IRAK 670 937 - -
Prci3g1555 1020 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 265 385 - -
Prci3g1555 1020 FunFam Putative LRR receptor-like serine/threonine-protein kinase 740 947 - -
Prci3g1555 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Prci3g1555 1020 SUPERFAMILY Protein kinase-like (PK-like) 647 938 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1555 Prci-Chr3 25457944 25471901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1555 4 830 Receptor kinase-like Gene Family AT1G29750 57.554 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci3g1555 PK_Tyr_Ser-Thr 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1555 - - qsa:O6P43_032037 1408.28