Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1546 ATGATGAGGTGGGGTCGAAAAAAATCATCTCCTGCGTCTTCATCTAGACCTTCATTTATCTCTCATGTCTCTCTTCTTTCATGGCTGTCCAAGTTCAAGCGGATGAGGGTCAATACAGAGCCAAGTGATGGAAAAGTGAAGCAAAAGGGAAAGCTGAATTCTCTTTCTGTTAGTTCATCACAGTATGCTTGTGGGCTTGGAGGTGGTGTGTCTCATGGTGGGGATGATGATGGTTTCTATAGAATTCCATTTGGTGAAGAGAGTCATGAGAGAAAGAGAAGTAAGGATATTCTTGAAACGGAGTTGAGCAATCTGGATGATGATCTTGTTATTCCAGTCTTTAGTTGTAATCGTGGTGGATGGAATGACAGGAAAAATGGAAGAAAAGAAGGAACTCTGAAGTTGAAGGAGAAGGAGGAGAAAGGTACAGTGGCAGAAAGCAAATTTCCAAAAGATTCCAAGATTTCAATGGAGATGGATGATTATGGTTATAATAGAGAAAAAGAACTAGAGAAGTTAAGGAGGACTTTTGAGAAGAAAGCACAGCAAGCTTTTGAGAAAGCTACGGATAAAGCTGAATCTGCATCTACTAAATCAGAAGAAAAATATGTGCTACAACTTGAGTCACCTAGGGCAATTTGTACACCTAGAAAACATTCTTTTGTTCCTTCAGTAGTTTCGAAGAATCACAACCTTAGAAGTATTAAAACTGAAAGTCGGTCCTCTGAGGAAAAATTGGGAGTGGAGAGGCAGCATTCGAGGAAGAATGAGACGAAGGCAAGGAAACCAAAGCACAGCTCTAAGGTGAGAGTTTATTCTCCAAGGGTGGGTTCCAAGACTGAAATCTGCAAAATAAAGGCTCTGGAAGACTTGAAGAAAGCAAAACTGAAGACGAAGAAAGCAAAGGAGAGAATGCTGGAGAAAACAGAAGTGTCAGATAGCTTTGCTGTGGTGAGATGTTCATTGAATCCAGAGAAGGACTTCAGAGATTCAATGGTTGAGATGATCACAGAGTTGCATATTCATCAACCAGAAGAATACGAAGAGCTTTTGACGTGTTATCTGACTCTGAATTCTGATGAATATCACGACCTCATTATCAAAGTGTTCCGTGAGGTATGGTTTGATATGAACAGAGATATTTTGGGTATTTCATTACACAGGCAGTTTTGCCAGTTATGA 1182 0.4019 MMRWGRKKSSPASSSRPSFISHVSLLSWLSKFKRMRVNTEPSDGKVKQKGKLNSLSVSSSQYACGLGGGVSHGGDDDGFYRIPFGEESHERKRSKDILETELSNLDDDLVIPVFSCNRGGWNDRKNGRKEGTLKLKEKEEKGTVAESKFPKDSKISMEMDDYGYNREKELEKLRRTFEKKAQQAFEKATDKAESASTKSEEKYVLQLESPRAICTPRKHSFVPSVVSKNHNLRSIKTESRSSEEKLGVERQHSRKNETKARKPKHSSKVRVYSPRVGSKTEICKIKALEDLKKAKLKTKKAKERMLEKTEVSDSFAVVRCSLNPEKDFRDSMVEMITELHIHQPEEYEELLTCYLTLNSDEYHDLIIKVFREVWFDMNRDILGISLHRQFCQL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1546 393 Coils Coil 288 308 - -
Prci3g1546 393 MobiDBLite consensus disorder prediction 233 256 - -
Prci3g1546 393 Pfam Transcriptional repressor, ovate 321 377 IPR006458 -
Prci3g1546 393 NCBIfam uncharacterized plant-specific domain TIGR01568 316 377 IPR006458 -
Prci3g1546 393 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 193 377 IPR038933 GO:0045892
Prci3g1546 393 MobiDBLite consensus disorder prediction 125 149 - -
Prci3g1546 393 MobiDBLite consensus disorder prediction 232 271 - -
Prci3g1546 393 Coils Coil 167 187 - -
Prci3g1546 393 ProSiteProfiles OVATE domain profile. 317 376 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1546 Prci-Chr3 25330666 25333521 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci3g1546 Ovate 5.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1546 - - pcin:129304814 723.776