Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1535 ATGGACAGTAGGTTCAACAGCCGCAGCCTAAATATCAGTGAGCAAGATGATACAGATATAGCTCAAGAAAATGTTGCAGAGTCACCTCCTTCCGCGGTCTTTAATATCAATACCCTCGTCCCTTCTACGTCTTCCCCGAAAAGAAGCAGGCGAGCCATACAGAAGAGGGTGGTGCAAATTCCGATCAAGGAAGTAGAAGGATCTCGGCTTAAAGGGGAGAGCAATACTCCGCCGTCCGATTCCTGGGCTTGGAGAAAGTACGGCCAAAAACCCATCAAAGGTTCGCCTTACCCCAGAGGATACTATCGATGCAGCAGTTCCAAAGGATGCCCGGCAAGAAAACAAGTGGAAAGGAGCCGCGTGGACCCCAGCATGATCGTCGTGACCTACTCTTGCGAGCACAATCACCCTTGGCCGGCTTCTCGAAATCATCACCACAACAAATCCGCCTCCAGCAAAGCCGTCGCCCCAGCCGAACCCATCGAGGCCCCGGCCGAGCAGGAACAGGAGTCCGAGGAGAAGTTCGGGGACCTCGGGGACGGGTCATTGATGAGCACGCCGGACGAGTTGGGGTGGTTCGGCGAAATGCAGAGGACGGCAACGACGTCGTCGGCGGTCCTGGAAAGTGCAATCCTGACGGGGGATGACGCGGACGTGGCGTCAATGTTCTTGCCGATGAGGGAGGAGGACGAGCTTCTGTTCGCTGACCTGGGGGAGCTGCCGGAGTGCTCGGTGGTGTTCCGGCGAGTGGGGATGGAAAGGGAGGAGGAGAGGCGGCGGTGCGCGGCGCCTTGGTGTGGGACCACAAGTTGA 813 0.5732 MDSRFNSRSLNISEQDDTDIAQENVAESPPSAVFNINTLVPSTSSPKRSRRAIQKRVVQIPIKEVEGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPSMIVVTYSCEHNHPWPASRNHHHNKSASSKAVAPAEPIEAPAEQEQESEEKFGDLGDGSLMSTPDELGWFGEMQRTATTSSAVLESAILTGDDADVASMFLPMREEDELLFADLGELPECSVVFRRVGMEREEERRRCAAPWCGTTS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1535 270 ProSiteProfiles WRKY domain profile. 79 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1535 270 SMART WRKY_cls 78 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1535 270 MobiDBLite consensus disorder prediction 68 89 - -
Prci3g1535 270 MobiDBLite consensus disorder prediction 1 29 - -
Prci3g1535 270 Pfam WRKY DNA -binding domain 80 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1535 270 Gene3D WRKY domain 68 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1535 270 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 245 IPR044810 GO:0003700
Prci3g1535 270 SUPERFAMILY WRKY DNA-binding domain 76 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1535 270 MobiDBLite consensus disorder prediction 138 188 - -
Prci3g1535 270 FunFam WRKY transcription factor 65 60 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1535 Prci-Chr3 25184948 25186835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1535 8 248 WRKY Transcription Factor Family AT1G29280 54.582 1.96e-84 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g1535 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1535 - - qsa:O6P43_012814 358.992