Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1534 ATGGACAGTAGGTTCAACAGCCGCAGCCTAAATATCAGTGAGCAAGATGATACAGATATAGCTCAAGAAAATGTTGCAGAGTCACCTCCTTCCGCGGTCTTTAATATCAATACCCTCGTCCCTTCTACGTCTTCCCCGAAAAGAAGGCGAGCCATACAGAAGAGGGTGGTGCAAATTCCGATCAAGGAAGTAGAAGGATCTCGGCTTAAAGGGGAGAGCAATACTCCGCCGTCCGATTCCTGGGCTTGGAGAAAGTACGGCCAAAAACCCATCAAAGGTTCGCCTTACCCCAGAGGATACTATCGATGCAGCAGTTCCAAAGGATGCCCGGCAAGAAAACAAGTGGAAAGGAGCCGCGTGGACCCCAGCATGATCGTCGTGACCTACTCTTGCGAGCACAATCACCCTTGGCCGGCTTCTCGAAATCATCACCACAACAAATCCGCCTCCAGCAAAGCCGTCGCCCCAGCCGAACCCATCGAGGCCCCGGCCGAGCAGGAACAGGAGTCCGAGGAGAAGTTCGGGGACCTCGGGGACGGGTCATTGATGAGCACGCCGGACGAGTTGGGGTGGTTCGGCGAAATGCAGAGGACGGCAACGACGTCGTCGGCGGTCCTGGAAAGTGCAATCCTGACGGGGGATGACGCGGACGTGGCGTCAATGTTCTTGCCGATGAGGGAGGAGGACGAGCTTCTGTTCGCTGACCTGGGGGAGCTGCCGGAGTGCTCGGTGGTGTTCCGGCGAGTGGGGATGGAAAGGGAGGAGGAGAGGCGGCGGTGCGCGGCGCCTTGGTGTGGGACCACAAGTTGA 810 0.5728 MDSRFNSRSLNISEQDDTDIAQENVAESPPSAVFNINTLVPSTSSPKRRRAIQKRVVQIPIKEVEGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPSMIVVTYSCEHNHPWPASRNHHHNKSASSKAVAPAEPIEAPAEQEQESEEKFGDLGDGSLMSTPDELGWFGEMQRTATTSSAVLESAILTGDDADVASMFLPMREEDELLFADLGELPECSVVFRRVGMEREEERRRCAAPWCGTTS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1534 269 MobiDBLite consensus disorder prediction 67 88 - -
Prci3g1534 269 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 244 IPR044810 GO:0003700
Prci3g1534 269 Pfam WRKY DNA -binding domain 79 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1534 269 MobiDBLite consensus disorder prediction 137 187 - -
Prci3g1534 269 MobiDBLite consensus disorder prediction 1 29 - -
Prci3g1534 269 Gene3D WRKY domain 67 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1534 269 SMART WRKY_cls 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1534 269 SUPERFAMILY WRKY DNA-binding domain 75 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1534 269 ProSiteProfiles WRKY domain profile. 78 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1534 269 FunFam WRKY transcription factor 65 58 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1534 Prci-Chr3 25184947 25186835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1534 8 247 WRKY Transcription Factor Family AT1G29280 54.183 3.72e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g1534 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1534 - - qsa:O6P43_012814 352.829