Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1531 ATGGACAGTAGGTTCAACAGCCGCAGCCTAAATATCAGTGAGCAAGATGATACAGATATAGCTCAAGAAAATGTTGCAGAGTCACCTCCTTCCGCGGTCTTTAATATCAATACCCTCGTCCCTTCTACGTCTTCCCCGAAAAGAAGCAGGCGAGCCATACAGAAGAGGGTGGTGCAAATTCCGATCAAGGAAGTAGAAGGATCTCGGCTTAAAGGGGAGAACAATACTCCGCCGTCCGATTCCTGGGCTTGGAGAAAGTACGGCCAAAAACCCATCAAAGGTTCGCCTTACCCCAGAGGATACTATCGATGCAGCAGTTCCAAAGGATGCCCGGCAAGAAAACAAGTGGAAAGGAGCCGCGTGGACCCCAGCATGATCGTCGTGACCTACTCTTGCGAGCACAATCACCCTTGGCCGGCTTCTCGAAATCATCACCACAACAAATCCGCCTCCAGCAAAGCCGTCGCCCCAGCCGAACTCATCGAGGCCCCGGCCGAGCAGGAACAGGAGTCCGAGGAGAAGTTCGGGGACCTCGGGGACGGGTCATTGATGAGCACGCCGGACGAGTTGGGGTGGTTCGGCGAAATGCAGAGGACGGCAACGACGTCGTCGGCGGTCCTGGAAAGTGCAATCCTGACGGGGGATGACGCGGACGTGGCGTCAATGTTCTTGCCGATGAGGGAGGAGGACGAGCTTCTGTTCGCTGACCTGGGGGAGCTGCCGGAGTGCTCGGTGGTGTTCCGGCGAGTGGGGATGGAAAGGGAGGAGGAGAGGCGGCGGTGCGCGGCGCCTTGGTGTGGGACCACAAGTTGA 813 0.5707 MDSRFNSRSLNISEQDDTDIAQENVAESPPSAVFNINTLVPSTSSPKRSRRAIQKRVVQIPIKEVEGSRLKGENNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPSMIVVTYSCEHNHPWPASRNHHHNKSASSKAVAPAELIEAPAEQEQESEEKFGDLGDGSLMSTPDELGWFGEMQRTATTSSAVLESAILTGDDADVASMFLPMREEDELLFADLGELPECSVVFRRVGMEREEERRRCAAPWCGTTS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1531 270 FunFam WRKY transcription factor 65 61 139 - -
Prci3g1531 270 ProSiteProfiles WRKY domain profile. 79 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1531 270 SUPERFAMILY WRKY DNA-binding domain 75 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1531 270 Gene3D WRKY domain 68 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g1531 270 SMART WRKY_cls 78 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1531 270 MobiDBLite consensus disorder prediction 1 29 - -
Prci3g1531 270 Pfam WRKY DNA -binding domain 80 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g1531 270 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 245 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1531 Prci-Chr3 25139503 25141487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1531 8 248 WRKY Transcription Factor Family AT1G29280 54.582 2.54e-84 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g1531 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1531 - - qsa:O6P43_012814 357.836