Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1516 ATGGATCAGGCAAGAAAGCCAGAAAGCGACGAGTTATCGGATCTCGTTGATGAAGGGACGGGAAAGAAAACTAGTCATTCGGTTGAAGGGTCCGCTGATGCAGTAGCTGGGGGCAGCTTGAGTGGAGCTATCAAAAGTGGAGATGTGACTTCAGAAGGCATGGGTAATGATAAGGAACTAAAGGAGGCGCCTGCAGAAGCTATGGATCAGGGCATGCGTGATCAGCAAAATAACAGCGACACATTCCACGCCGTTGATCAAGGAACAAGTTATAATTCAAGGAATTTCCTTAATAGCCCTGTTCTTGAGACCGTGGTTGTAATAGATTCTGCTGAGACCGAGTTTGTGAATGGAGACAATAGGAAGTCGGAGGCAAAGATCAATGAATCGGGGCAGATCAAGGCATCCATGAAATCACCAAAAAGGCCGTCTGAAGCGGATAAAAATTCATGTGTGATCAATATAAAGTCTGGTAGCTGCGGAGAGTTTAGCGAGAATGTGGAGGGTGAAAGAATTTGTAGGATTTGCCATCTGTCTTCCGGGCAGCCATCAGATTCAACAGCTGCTAGCCCTACAAACAGCACCCCTACTGGAGATTTAATTCAGCTTGGCTGTGCGTGTAAAGATGAGCTGGGTATTGCGCACAGTCATTGTGCTGAGGCATGGTTCAAGCTAAAAGGAAACAGCCTACATTTACTTTCAACTGTTCTACAAATTTATTGGATGGGCAGTTGGAGGGTTCCACAATAA 750 0.4587 MDQARKPESDELSDLVDEGTGKKTSHSVEGSADAVAGGSLSGAIKSGDVTSEGMGNDKELKEAPAEAMDQGMRDQQNNSDTFHAVDQGTSYNSRNFLNSPVLETVVVIDSAETEFVNGDNRKSEAKINESGQIKASMKSPKRPSEADKNSCVINIKSGSCGEFSENVEGERICRICHLSSGQPSDSTAASPTNSTPTGDLIQLGCACKDELGIAHSHCAEAWFKLKGNSLHLLSTVLQIYWMGSWRVPQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1516 249 MobiDBLite consensus disorder prediction 71 86 - -
Prci3g1516 249 MobiDBLite consensus disorder prediction 1 86 - -
Prci3g1516 249 MobiDBLite consensus disorder prediction 120 147 - -
Prci3g1516 249 MobiDBLite consensus disorder prediction 52 68 - -
Prci3g1516 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 166 234 IPR013083 -
Prci3g1516 249 PANTHER ZINC FINGER, RING-CH-TYPE 60 229 - -
Prci3g1516 249 SUPERFAMILY RING/U-box 169 228 - -
Prci3g1516 249 ProSiteProfiles Zinc finger RING-CH-type profile. 165 249 IPR011016 GO:0008270
Prci3g1516 249 SMART ringv_2 172 229 IPR011016 GO:0008270
Prci3g1516 249 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1516 Prci-Chr3 24957407 24961985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1516 100 230 C3H Transcription Factor Family AT5G05830 36.567 1.60e-14 68.6