Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1504 ATGGCCGACGCTGTCTCCAGCAAGGCCTCCACTAGCGGCTCCAACAAGAAGTTCGGCGCAAATAGCCTCTTGCTGGGTCGCTTCGAGGTCGGCAAGCTCCTCGGCCATGGCACGTTCGCTAAGGTCTACCATGCCCGCAATGTTCAAACCGGCGAAGGGGTCGCCATCAAGGTCATTGATAAGGAGAAGATCCTCAAGAGCGGCCTCGTCGCTCACATCAAGCGCGAGATCTCCATCCTCCGACGCGTCCGACACCCCAACATCGTTCAGCTCTTCGAGGTCATGGCCACCAAGACCAAAATCTATTTTGTGATGGAATATGTTCGTGGGGGTGAGCTGTTCAATAAAGTCGCTAAAGGGCGACTGAAAGAGGAAAGTGCCAGGAAATACTTTCAGCAACTTATCTCCGCCGTCGGATTCTGCCACGCGAGAGGGGTATTTCATAGGGATCTCAAGCCTGAAAACTTGTTGCTCGACGAAAATGGGGATCTCAAGGTGTCTGATTTTGGATTGAGCGCTGTCTCCGATCAAATTCTGCCAGATGGTTTGTTCCACACATTTTGCGGGACTCCTGCTTACGTCGCCCCTGAGGTATTGGCTAGAAAGGGTTACGATGGGGCCAAGGTTGATGTCTGGGCTTGTGGGGTTGTTCTGTTTGTTTTGATGGCTGGGTACTTGCCTTTCCATGACCAGAATATCATGGCAATGTATAAGAAGATTTACAGGGGTGAGTTCAGATGTCCCAAGTGGTTTTCATCCGATCTCACTCGACTTGTCACGCGTCTCCTTGATACCAACCCGCAAACCCGAATTTCCATTCCGGAGATTATGGAGAACCGGTGGTTCAAGAAAGGGTTCAAACAGATAAAGTTCTATGTGGAGGATGATAAGCTTTGTAATATTGACGATAAGATGGACAAGATAGAGGATATAGAATCGATGTCGGACTACTCCGTATCAGAATCTGATTCGGAGGTAGAGACCAGAAGAAGAAATGCTTCGCTGCCGAGACCTGCGAGCTTGAATGCATTTGACATAATATCATTTTCTCCTGGTTTTGATCTTTCTGGGTTGTTTGAGGAGAAGGGGGATGAGGCGAGGTTTGTGTCTGGTGCACCAGTTTCAAAGATCATATCAAAATTGGAGGAAATTGCCAGACTGGTCAGCTTCACTGTGAGGAAGAAAGATTGCAGAGTAAGCTTGGAGGGTTCGAGAGAAAGCGCAAAGGGGCCATTGACAATTGCTGCAGAGATATTTGAATTAACACCGTCTTTGGTGGTGTTGGAGGTCAAGAAAAAAGGAGGGGATAAAACAGAATATGAACAATTCTGCAACGCTGAATTGAGACCTGGATTACAGAATTTGATGACAGAGGAACCTGCTACTTCTTCCCAGATACCTAGTATAGCTACTGAACCGCCTCAACTACCTATTGATATTGATCCTCCACATTACATGCCTTCAGATACCGAATAG 1476 0.4776 MADAVSSKASTSGSNKKFGANSLLLGRFEVGKLLGHGTFAKVYHARNVQTGEGVAIKVIDKEKILKSGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEESARKYFQQLISAVGFCHARGVFHRDLKPENLLLDENGDLKVSDFGLSAVSDQILPDGLFHTFCGTPAYVAPEVLARKGYDGAKVDVWACGVVLFVLMAGYLPFHDQNIMAMYKKIYRGEFRCPKWFSSDLTRLVTRLLDTNPQTRISIPEIMENRWFKKGFKQIKFYVEDDKLCNIDDKMDKIEDIESMSDYSVSESDSEVETRRRNASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSKIISKLEEIARLVSFTVRKKDCRVSLEGSRESAKGPLTIAAEIFELTPSLVVLEVKKKGGDKTEYEQFCNAELRPGLQNLMTEEPATSSQIPSIATEPPQLPIDIDPPHYMPSDTE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1504 491 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1504 491 CDD STKc_SnRK3 27 281 - -
Prci3g1504 491 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 452 - -
Prci3g1504 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Prci3g1504 491 MobiDBLite consensus disorder prediction 458 491 - -
Prci3g1504 491 ProSiteProfiles NAF domain profile. 336 360 IPR018451 GO:0007165
Prci3g1504 491 Gene3D Transferase(Phosphotransferase) domain 1 20 338 - -
Prci3g1504 491 FunFam Non-specific serine/threonine protein kinase 19 331 - -
Prci3g1504 491 Pfam NAF domain 338 394 IPR004041 GO:0007165
Prci3g1504 491 FunFam Non-specific serine/threonine protein kinase 338 456 - -
Prci3g1504 491 SMART serkin_6 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1504 491 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Prci3g1504 491 CDD CIPK_C 342 453 - -
Prci3g1504 491 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1504 491 FunFam Non-specific serine/threonine protein kinase 20 107 - -
Prci3g1504 491 SUPERFAMILY Protein kinase-like (PK-like) 24 283 IPR011009 -
Prci3g1504 491 Gene3D Kinase associated domain 1, KA1 339 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1504 Prci-Chr3 24843790 24849118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1504 1 491 CBL-interacting serine-threonine protein kinases AT4G18700 75.050 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci3g1504 Pkinase 3.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1504 - - gmx:100790133 768.844