Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1502 ATGGAAAAGCAGGGCAAAATTTTGATGCAGAAATATGAGCTTGGCCGTTTGCTAGGCCAAGGCACATTCGCGAAGGTGTACCATGCAAGGAACCTGAAAACTGGGCAACCTGTTGCCATGAAGGTCATCGATAAAGAGAAGATTATCAAAGTTGGCATGAACGATCAAATCAAGCGAGAAATCTCTGTGATGGGCATGGTGAAGCATCCCAACATTGTGCAGCTTTACGAGGTGCTGGCAAGCAAGACCAAGATTTATTTCGCCATGGAGTACGTGAAAGGTGGAGAGCTTCTGGCCAAAGTTCTCAAAGGGAAACTGAAGGAAGACTTAGCCAGAAAGTACTTTCAGCAGCTGATTGGGGCCGTGGATTTCTGCCATAGCAGAGGAGTGTATCACCGTGACCTGAAACTAGAGAATCTTCTGCTGGACGAAAATGGGGACATTAAAGTTTCAGACTTTGGACTCAGTGCGTTGTGGGAATCCAGAAAGACTGATGGACTTCTACACACCATGTGTGGGACTCCAGCTTATGTAGCCCCTGAAGTGATCAATAAGAAAGGCTATGATGGTGCCAAGGCAGATATTTGGTCCTGCGGGGTCATTCTTTTTGTTCTTCTTGCTGGGTTTCTTCCTTTCCAAGACAAGAATTTAATCTCAATGTACATGAAGATTAGCAGAGCAGAGTTTACGTGTCCACTATGGTTCTCGCCTGAGGCCAGAAAGCTTCTCTCCAGAATCCTTGATCCAAACCCAAGAACAAGATTGTCTATCTCCAGTATAAAGAAAACACCATGGCTCAGAAAGGAATATAACCAGATCGAAGCACCTCGGTTACTATTATCTCCTTTTAGCGGCTGCCAAGTTGAATCTGCCTTTGATTCATCAACTTTAGATGATGGCTTAGTGCCCAAAAACGAAGCAGAAAGATCCATGAAACCACCTAGTTTCAATGCATTTGACATCATATCTCTGTCTTCAGGATTTGACCTTTCTCCTCTGTTTGAGAAAAACAATATTTCAACACACAAGGATAGATTCACCACCACAAGAGAAGCCTCCACGATTGTGTCAAAACTGGAGGAGATAGCTCAGGTGGATAGCAAATTCAAGGTCTTGAAGAAGAATGGTACAGTGACATTACAGGGTAGCAAGGTAGGGAGAAAGGGACAACTTGGGATAGATGCAGAGATTTTTGAAGTTACATCTTCGTTTCACATTGTGGAGGTGAAGAAAACAGCAGGAGACACATTGGAATATATACAATTCAGAGACCAAAACTTAAAACCTTCTCTCAAGGATATAGGGTGGGAATGGCGAGGAAGCGAGCATGATGGATAG 1338 0.438 MEKQGKILMQKYELGRLLGQGTFAKVYHARNLKTGQPVAMKVIDKEKIIKVGMNDQIKREISVMGMVKHPNIVQLYEVLASKTKIYFAMEYVKGGELLAKVLKGKLKEDLARKYFQQLIGAVDFCHSRGVYHRDLKLENLLLDENGDIKVSDFGLSALWESRKTDGLLHTMCGTPAYVAPEVINKKGYDGAKADIWSCGVILFVLLAGFLPFQDKNLISMYMKISRAEFTCPLWFSPEARKLLSRILDPNPRTRLSISSIKKTPWLRKEYNQIEAPRLLLSPFSGCQVESAFDSSTLDDGLVPKNEAERSMKPPSFNAFDIISLSSGFDLSPLFEKNNISTHKDRFTTTREASTIVSKLEEIAQVDSKFKVLKKNGTVTLQGSKVGRKGQLGIDAEIFEVTSSFHIVEVKKTAGDTLEYIQFRDQNLKPSLKDIGWEWRGSEHDG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1502 445 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Prci3g1502 445 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Prci3g1502 445 CDD STKc_SnRK3 11 265 - -
Prci3g1502 445 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Prci3g1502 445 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1502 445 SUPERFAMILY Protein kinase-like (PK-like) 8 301 IPR011009 -
Prci3g1502 445 CDD CIPK_C 317 432 - -
Prci3g1502 445 Pfam NAF domain 313 371 IPR004041 GO:0007165
Prci3g1502 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Prci3g1502 445 Gene3D Transferase(Phosphotransferase) domain 1 2 304 - -
Prci3g1502 445 FunFam Non-specific serine/threonine protein kinase 5 295 - -
Prci3g1502 445 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1502 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 421 - -
Prci3g1502 445 Gene3D Kinase associated domain 1, KA1 310 437 - -
Prci3g1502 445 FunFam Non-specific serine/threonine protein kinase 311 436 - -
Prci3g1502 445 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1502 Prci-Chr3 24819183 24821324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1502 1 440 CBL-interacting serine-threonine protein kinases AT5G45820 64.853 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci3g1502 Pkinase 4.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1502 K07198 - mof:131144417 612.838