Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1501 ATGGGTTCTAGATGTGGCTCATATGTATTTTGGAGCAGAATTTATTCTGCTTTAATTTGTCTGTGGGGTATTCGTTCATGTTGGTCCCTTAATGACGAAGTAATGGCTTTGTTAAAGTTTCGGGCGAGAATAGATTATGATCCTCGTGGAGCTTTGGCTAACTGGAAACCAGATGATCTTGATCCTTGTGACTGGTTGGGTGTTCAATGTGTTGACAATACAGTGCAAATGCTTGTATTATGCAAGAATAAGTTTTCTGGCACCATTCCTAAAGAATTTGGAGAGCTAACTAAGCTGGAGTTGTTGGATTTGAGGGACAATTGCTTGACTGGAAGTGTTGCAGCGGAAATTGGCAGGATGCTGTTCCTAAAAGACTTGAACCTTTTTGGCAGCAACATTGAAGTCAATGTTCCTCAAGATCTTGGGAAGCATGAATTACTATCTAAACGACAATTGATTGATAATCATACGTCTCATGAGATAGCTGAAATTGGTTGCATGAATAGAAAAATTGGACACTGTGTGCGGCAGAGCAATTTCAAACTATGGAACATGAGACAATCACTTGTCATTCCAATTAAAGGAGCAATTACAAAATGCCTCAATTCCTTGGCGCTGCCATTGTTCAAGCTACAGAACTACCATAATAACTACGAAGATAACTGCTTTGACAATCAGCCTAGTGAGTCAGCAATTGCTCAAAATCTACTTGACAAATTTAAACGTCGTAAATTACTTGATCAGTCCAGTAACCTCGTAGCTGCCCCTTTTAGTGGTGGGTCTGCTAAACAGATCATTAGTCTCCCATCCACACTGAGTAGCGGAGCTTTTCCGGCTACATTAAATACCAGTGGGAATCATAATCAGTCACCCACACCATTGCCTTCACCTGCTTCTTCTGGAAATGAAAAAAACAGACAACCTTCAGCTGAAGATAATGCTTCTGGAGATGCTTGGAAGTACATAATTATTATATTAGGTGTGCTTTTGTTGGTCATTGTTGCTGTTGCCGTATTTTGCCTGTGGAATAAGAGAGCAGTAAAAGCAATTAGGCCATGGAAGACAGGGTTAAGCGGACAGTTACAGAAAGCTTTTGTGACAGGAGTCCCGAAGCTAAATCGAGCAGAGTTGGAGGTAGCCTGTGAGGATTTCAGCAATATTGTTACAAGCTTGCCTCATTGCACCGTATACAAGGGAACTCTGTCCAGTGGAGTAGAGATTGCAGTTGCATCAGCTATGATCACTTCTGCACAAGACTGGTCGAAGAATATGGAGATTGCCTACCGAAAAATGATTGACACCATGTCTCGGGTAAATCATAAGAATTTTATTAATCTTATTGGCTACTGTGAGGAAGAAGAGCCATTTACTCGGATGATGGTGACTGAGTATGCTCCTAATGGATCCCTATTTGAGCATTTGCATGTTGAGGGGCTTGAACACCTAGATTGGAATTCAAGAATGAGGGTTATTATGGGCGTGGCTTATTGTCTTCAGTACATGCACCATGACCTGAATCCATCAGTAGCTCATAGCAACCTCGATTCACATTCAGTCTTGTTAACAGATGATTTTGCTGCGAAGATTGCACAGGTCATTTTTGCCTCGTCATTGGAAGATAAATCAATTTCAAAGAATTCCGAATTGACATTCAATGCTGATCCCGAAACTGATGTATATTGCTTTGGAAAATTGTTATTCGAAATCATTTCTGGGAAATTGCCAGACTGTGAAGAACAAAAACAACTTGAGAAATTGGCTGGTGAATTTTCAAATGGTAAGAGAAGCATCAGTAATATGATCGATCCTTCCCTTGAATCCTTCAGAGAGAAAGAACTTGATGTGGTTTGTGAGGTGATCCATGAATGCACCCAACCTAATCCGAGTTCGCGACCCACAATGAAGGACATAACTTCCAAATTAAGGAATGTTATTGGCATGTCACCTGACCAAGCAGCCCCAAGACTTTCTCCACTCTGGTGGGCTGAACTAGAGATCTTATCAGAAGAGGCAACATAA 2019 0.4101 MGSRCGSYVFWSRIYSALICLWGIRSCWSLNDEVMALLKFRARIDYDPRGALANWKPDDLDPCDWLGVQCVDNTVQMLVLCKNKFSGTIPKEFGELTKLELLDLRDNCLTGSVAAEIGRMLFLKDLNLFGSNIEVNVPQDLGKHELLSKRQLIDNHTSHEIAEIGCMNRKIGHCVRQSNFKLWNMRQSLVIPIKGAITKCLNSLALPLFKLQNYHNNYEDNCFDNQPSESAIAQNLLDKFKRRKLLDQSSNLVAAPFSGGSAKQIISLPSTLSSGAFPATLNTSGNHNQSPTPLPSPASSGNEKNRQPSAEDNASGDAWKYIIIILGVLLLVIVAVAVFCLWNKRAVKAIRPWKTGLSGQLQKAFVTGVPKLNRAELEVACEDFSNIVTSLPHCTVYKGTLSSGVEIAVASAMITSAQDWSKNMEIAYRKMIDTMSRVNHKNFINLIGYCEEEEPFTRMMVTEYAPNGSLFEHLHVEGLEHLDWNSRMRVIMGVAYCLQYMHHDLNPSVAHSNLDSHSVLLTDDFAAKIAQVIFASSLEDKSISKNSELTFNADPETDVYCFGKLLFEIISGKLPDCEEQKQLEKLAGEFSNGKRSISNMIDPSLESFREKELDVVCEVIHECTQPNPSSRPTMKDITSKLRNVIGMSPDQAAPRLSPLWWAELEILSEEAT 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1501 672 Gene3D Transferase(Phosphotransferase) domain 1 465 652 - -
Prci3g1501 672 MobiDBLite consensus disorder prediction 279 313 - -
Prci3g1501 672 FunFam Leucine-rich repeat receptor-like kinase 32 157 - -
Prci3g1501 672 Pfam Protein tyrosine and serine/threonine kinase 395 641 IPR001245 GO:0004672|GO:0006468
Prci3g1501 672 PANTHER PROTEIN MALE DISCOVERER 2 18 669 - -
Prci3g1501 672 ProSiteProfiles Protein kinase domain profile. 347 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1501 672 SUPERFAMILY Protein kinase-like (PK-like) 388 640 IPR011009 -
Prci3g1501 672 Gene3D Ribonuclease Inhibitor 32 154 IPR032675 -
Prci3g1501 672 SUPERFAMILY L domain-like 27 160 - -
Prci3g1501 672 MobiDBLite consensus disorder prediction 279 312 - -
Prci3g1501 672 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Prci3g1501 672 FunFam Inactive receptor-like serine/threonine-protein kinase 356 464 - -
Prci3g1501 672 Gene3D Phosphorylase Kinase; domain 1 359 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1501 Prci-Chr3 24802559 24809289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1501 36 649 Receptor kinase-like Gene Family AT2G35620 26.235 1.29e-41 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Prci3g1501 PK_Tyr_Ser-Thr 2.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1501 - - pcin:129306657 1328.15