Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1500 ATGGGTTCTAGATGTGGCTCATATGTATTTTGGAGCAGAATTTATTCTGCTTTAATTTGTCTGTGGGGTATTCGTTCATGTTGGTCCCTTAATGACGAAGTAATGGCTTTGTTAAAGTTTCGGGCGAGAATAGATTATGATCCTCGTGGAGCTTTGGCTAACTGGAAACCAGATGATCTTGATCCTTGTGACTGGTTGGGTGTTCAATGTGTTGACAATACAGTGCAAATGCTGAACTTAAGTGAGCTATCTTTGGAAGGTACACTGGCTCCTGAGCTTGGGAAATTAAGTAACTTGAAATATCTTGTATTATGCAAGAATAAGTTTTCTGGCACCATTCCTAAAGAATTTGGAGAGCTAACTAAGCTGGAGTTGTTGGATTTGAGGGACAATTGCTTGACTGGAAGTGTTGCAGCGGAAATTGGCAGGATGCTGTTCCTAAAAGACTTGAACCTTTTTGGCAGCAACATTGAAGTCAATGTTCCTCAAGATCTTGGGAAGCATGAATTACTATCTAAACGACAATTGATTGATAATCATACGTCTCATGAGATAGCTGAAATTGGTTGCATGAATAGAAAAATTGGACACTGTGTGCGGCAGAGCAATTTCAAACTATGGAACATGAGACAATCACTTGTCATTCCAATTAAAGGAGCAATTACAAAATGCCTCAATTCCTTGGCGCTGCCATTGTTCAAGCTACAGAACTACCATAATAACTACGAAGATAACTGCTTTGACAATCAGCCTAGTGAGTCAGCAATTGCTCAAAATCTACTTGACAAATTTAAACGTCGTAAATTACTTGATCAGTCCAGTAACCTCGTAGCTGCCCCTTTTAGTGGTGGGTCTGCTAAACAGATCATTAGTCTCCCATCCACACTGAGTAGCGGAGCTTTTCCGGCTACATTAAATACCAGTGGGAATCATAATCAGTCACCCACACCATTGCCTTCACCTGCTTCTTCTGGAAATGAAAAAAACAGACAACCTTCAGCTGAAGATAATGCTTCTGGAGATGCTTGGAAGTACATAATTATTATATTAGGTGTGCTTTTGTTGGTCATTGTTGCTGTTGCCGTATTTTGCCTGTGGAATAAGAGAGCAGTAAAAGCAATTAGGCCATGGAAGACAGGGTTAAGCGGACAGTTACAGAAAGCTTTTGTGACAGGAGTCCCGAAGCTAAATCGAGCAGAGTTGGAGGTAGCCTGTGAGGATTTCAGCAATATTGTTACAAGCTTGCCTCATTGCACCGTATACAAGGGAACTCTGTCCAGTGGAGTAGAGATTGCAGTTGCATCAGCTATGATCACTTCTGCACAAGACTGGTCGAAGAATATGGAGATTGCCTACCGAAAAATGATTGACACCATGTCTCGGGTAAATCATAAGAATTTTATTAATCTTATTGGCTACTGTGAGGAAGAAGAGCCATTTACTCGGATGATGGTGACTGAGTATGCTCCTAATGGATCCCTATTTGAGCATTTGCATGTTGAGGGGCTTGAACACCTAGATTGGAATTCAAGAATGAGGGTTATTATGGGCGTGGCTTATTGTCTTCAGTACATGCACCATGACCTGAATCCATCAGTAGCTCATAGCAACCTCGATTCACATTCAGTCTTGTTAACAGATGATTTTGCTGCGAAGATTGCACAGGTCATTTTTGCCTCGTCATTGGAAGATAAATCAATTTCAAAGAATTCCGAATTGACATTCAATGCTGATCCCGAAACTGATGTATATTGCTTTGGAAAATTGTTATTCGAAATCATTTCTGGGAAATTGCCAGACTGTGAAGAACAAAAACAACTTGAGAAATTGGCTGGTGAATTTTCAAATGGTAAGAGAAGCATCAGTAATATGATCGATCCTTCCCTTGAATCCTTCAGAGAGAAAGAACTTGATGTGGTTTGTGAGGTGATCCATGAATGCACCCAACCTAATCCGAGTTCGCGACCCACAATGAAGGACATAACTTCCAAATTAAGGAATGTTATTGGCATGTCACCTGACCAAGCAGCCCCAAGACTTTCTCCACTCTGGTGGGCTGAACTAGAGATCTTATCAGAAGAGGCAACATAA 2091 0.4094 MGSRCGSYVFWSRIYSALICLWGIRSCWSLNDEVMALLKFRARIDYDPRGALANWKPDDLDPCDWLGVQCVDNTVQMLNLSELSLEGTLAPELGKLSNLKYLVLCKNKFSGTIPKEFGELTKLELLDLRDNCLTGSVAAEIGRMLFLKDLNLFGSNIEVNVPQDLGKHELLSKRQLIDNHTSHEIAEIGCMNRKIGHCVRQSNFKLWNMRQSLVIPIKGAITKCLNSLALPLFKLQNYHNNYEDNCFDNQPSESAIAQNLLDKFKRRKLLDQSSNLVAAPFSGGSAKQIISLPSTLSSGAFPATLNTSGNHNQSPTPLPSPASSGNEKNRQPSAEDNASGDAWKYIIIILGVLLLVIVAVAVFCLWNKRAVKAIRPWKTGLSGQLQKAFVTGVPKLNRAELEVACEDFSNIVTSLPHCTVYKGTLSSGVEIAVASAMITSAQDWSKNMEIAYRKMIDTMSRVNHKNFINLIGYCEEEEPFTRMMVTEYAPNGSLFEHLHVEGLEHLDWNSRMRVIMGVAYCLQYMHHDLNPSVAHSNLDSHSVLLTDDFAAKIAQVIFASSLEDKSISKNSELTFNADPETDVYCFGKLLFEIISGKLPDCEEQKQLEKLAGEFSNGKRSISNMIDPSLESFREKELDVVCEVIHECTQPNPSSRPTMKDITSKLRNVIGMSPDQAAPRLSPLWWAELEILSEEAT 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1500 696 Gene3D Phosphorylase Kinase; domain 1 383 488 - -
Prci3g1500 696 Gene3D Ribonuclease Inhibitor 30 210 IPR032675 -
Prci3g1500 696 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Prci3g1500 696 SUPERFAMILY L domain-like 27 195 - -
Prci3g1500 696 MobiDBLite consensus disorder prediction 303 336 - -
Prci3g1500 696 FunFam Nuclear pore complex protein NUP107 30 187 - -
Prci3g1500 696 Gene3D Transferase(Phosphotransferase) domain 1 489 676 - -
Prci3g1500 696 Pfam Protein tyrosine and serine/threonine kinase 419 665 IPR001245 GO:0004672|GO:0006468
Prci3g1500 696 FunFam Inactive receptor-like serine/threonine-protein kinase 380 488 - -
Prci3g1500 696 PANTHER PROTEIN MALE DISCOVERER 2 18 693 - -
Prci3g1500 696 SUPERFAMILY Protein kinase-like (PK-like) 412 664 IPR011009 -
Prci3g1500 696 ProSiteProfiles Protein kinase domain profile. 371 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1500 696 MobiDBLite consensus disorder prediction 303 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1500 Prci-Chr3 24802559 24809289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1500 36 673 Receptor kinase-like Gene Family AT2G35620 25.224 2.09e-39 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Prci3g1500 PK_Tyr_Ser-Thr 2.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1500 - - pcin:129306657 1386.32