Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1495 ATGATGACAATGTCGTCATCAGAAGGATACCGGATCGAAGACAAGAAGAATGGCAGGTGTACTAAGGAACAGGTGGCCGAGGACGTGGCTTCATTGGGATCTTCGTCTCAGGCATGCTCATCCTTTGACTTGAATGAAGAAGCGAGCATAGAGGACAAGTACGATGAAACAGATCACTTTCATATCATGGCTGAGGAGCATGATGATGAGAAAGCAAAGGATGAAGAAGGTGCTTCATCTGATGATAGAAGCACGTCCAGGGAAGGGAATAATGAAAGAAGAAGTGTGAGACAATATGTAAGATCAAAGATGCCTCGCCTTCGATGGACTCCTGAACTACATCTCTCGTTTGTTCAAGCTGTTGAAAGGCTTGGTGGTCAAGAGAGAGCTACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGGCTTAGCATTGCTCATGTCAAGAGTCACCTGCAGATGTACCGAAGCAAGAAACTTGACGAGGCCGGGCAAGTTGTAGGTCGAACGCACAGATGGAGCCAAACGGAAGGTGATCTCATTTCTCAGATATGGCATTATCAGTCTGCGAGCCCTCACCAGTATAATTTCAAGATGGGAAACGGAGGAATCATCCTCGCAAGTAATTGCAATCACGACCACCAGACTAGTCTCTTTCCTCCCTCCTTTGCCCTATCACGTCCACACACAAAGCCTGCAACTGATTCTTGGCAGCAACAGTGGAACTTGAATCATCAACCTGCAGGAAGACTAATAGTCAACCAAGAAGTGATGGACCCATTAATGAACAGCAAGATAACGCCCCTGAGACGCAGACAATTTCCGGAAGAAAAAAGGTGGCCTCCACTGGAGATGATGAAGGCTCATCAAAGGAAGTTAAAAGGGTCGCCTACCAATTACACTAATGCGAGCTCAACACCAGATAGTGACAGTCTCAAGCTAGATTATGAACCCCCGTTTCGGATCGAGCTGAATGGAGCGATGGTGCGGGAAGAAAAGCAATGGCTACCTGATTTGCAATTGGGGCTGAGTCTGGGAAGTGGCAGAGACACCCAAGCCCAAGAAATTAGCACTGAGCTTTCGCTTTCTTAG 1095 0.4712 MMTMSSSEGYRIEDKKNGRCTKEQVAEDVASLGSSSQACSSFDLNEEASIEDKYDETDHFHIMAEEHDDEKAKDEEGASSDDRSTSREGNNERRSVRQYVRSKMPRLRWTPELHLSFVQAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVVGRTHRWSQTEGDLISQIWHYQSASPHQYNFKMGNGGIILASNCNHDHQTSLFPPSFALSRPHTKPATDSWQQQWNLNHQPAGRLIVNQEVMDPLMNSKITPLRRRQFPEEKRWPPLEMMKAHQRKLKGSPTNYTNASSTPDSDSLKLDYEPPFRIELNGAMVREEKQWLPDLQLGLSLGSGRDTQAQEISTELSLS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1495 364 MobiDBLite consensus disorder prediction 295 312 - -
Prci3g1495 364 Gene3D - 104 161 - -
Prci3g1495 364 FunFam Myb family transcription factor 103 161 - -
Prci3g1495 364 Pfam Myb-like DNA-binding domain 107 157 IPR001005 -
Prci3g1495 364 SUPERFAMILY Homeodomain-like 103 159 IPR009057 -
Prci3g1495 364 MobiDBLite consensus disorder prediction 346 364 - -
Prci3g1495 364 MobiDBLite consensus disorder prediction 53 98 - -
Prci3g1495 364 MobiDBLite consensus disorder prediction 1 21 - -
Prci3g1495 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 84 216 IPR046955 GO:0003700
Prci3g1495 364 NCBIfam myb-like DNA-binding domain, SHAQKYF class 105 160 IPR006447 GO:0003677
Prci3g1495 364 MobiDBLite consensus disorder prediction 290 315 - -
Prci3g1495 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 161 IPR017930 -
Prci3g1495 364 MobiDBLite consensus disorder prediction 344 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1495 Prci-Chr3 24790777 24795755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1495 95 166 G2-like Transcription Factor Family AT2G42660 76.389 9.65e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g1495 Myb_DNA-binding 7.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1495 - - pcin:129307103 733.406